Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1519 ATGCAATACACGAAACCAGCGTTTCGAAACGCGGCTTTCTACTGCCACGTCTTCTCTCGCTCCTTAACCTTAAACCCTAACCCTCTGCTCCTCGTTTCCCCGTTTCGGAAACCCGAAACGTTTCGCCTCGCTTCACCCGTTTCGTGCTTATCCTCCTCCTCAATGGCGGTGCCTCCGTCTTCGCTGGAGAAGCAATTCGATGACTTTAGGGTTCAGCTGGAAGAATCTGGAACCTTGCGCGAACGAATTCGAAGCGTCGTTTCGGAGATTGAGTCCTCCACTAGGCTCATCTATGCCACACTTCTTCTCGTTCACCAGTCTCGTCCCACTCCCGAGCTTTTAGAGAAGGCCAAGTCTCATGTTAATGTGTTAAAGAAGCAGTATAAGCAACTTGCTGAAGTTGTTGGAGGATGCCCTGGGCAATACTATAGGTACCATGGTGATTGGAAGAGTGAGACACAGTCTGTAGTTTCAATGCTTACATTTATGCACTGGCTTGAAACAGGAAGCCTTCTCGAGCACAAAGAGGCTGAGGAAAAACTTGGGTTGAATAGTTCAGAATTTGGCCTAGACGTTGAAGATTACTTAATAGGTGTCTGTTTTATGTCTAATGAATTGCCAAGGTATGTGGTGAATCAAGTGACAGCTGGGGACTATGATTGTCCAAGGAAGGTCTTAAAGTTCTTAACAGATCTCCATGCTGCATTCCGCATGCTTAATCTACGAAATGATTTTTTGCGAAAGAAGTTTGATGGCATGAAGTATGACTTAAGAAAAGTCGAAGAAGTTTACTATGATGTTAAGATTCGGGGTTTGACACCGAATGGTGAGCCAGTTGGAGACTTGGAGATCAAGGAATCGCAGGACAATCTTAATCTTAAGTTGTGA 888 0.4527 MQYTKPAFRNAAFYCHVFSRSLTLNPNPLLLVSPFRKPETFRLASPVSCLSSSSMAVPPSSLEKQFDDFRVQLEESGTLRERIRSVVSEIESSTRLIYATLLLVHQSRPTPELLEKAKSHVNVLKKQYKQLAEVVGGCPGQYYRYHGDWKSETQSVVSMLTFMHWLETGSLLEHKEAEEKLGLNSSEFGLDVEDYLIGVCFMSNELPRYVVNQVTAGDYDCPRKVLKFLTDLHAAFRMLNLRNDFLRKKFDGMKYDLRKVEEVYYDVKIRGLTPNGEPVGDLEIKESQDNLNLKL* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1519 295 CDD Translin 69 271 IPR033956 GO:0003697|GO:0003723|GO:0016070
Gso19g1519 295 PANTHER TRANSLIN 56 275 IPR033956 GO:0003697|GO:0003723|GO:0016070
Gso19g1519 295 Coils Coil 114 134 - -
Gso19g1519 295 Pfam Translin family 80 271 IPR002848 GO:0043565
Gso19g1519 295 Gene3D Translin; domain 2 189 287 IPR016069 GO:0043565
Gso19g1519 295 PANTHER TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X 56 275 IPR002848 GO:0043565
Gso19g1519 295 SUPERFAMILY Translin 61 272 IPR036081 GO:0043565
Gso19g1519 295 Gene3D Translin; domain 1 50 188 IPR016068 GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1519 Gso-Chr19 44066897 44070681 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1519 - - gmx:100811968 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1519 19 44066897 44070681 Gso3g1535 3 41263134 41266391 GST