Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1434 ATGAACGACCCACGCCGCTCTTCCGAATGGGTAGACGAAAAACACAAATGGCACCGGTTCATAAAGTTGGCTCTATATAACCCCCCGCATCGCAGCGTCACATTCAAAACAAACTCCGAAAGAAACAGTCAGAATCAGAATCAGAAGAAGCGAGCAAAGATGTCGGGTCGTGGAAAGGGAGGCAAGGGTTTGGGTAAGGGAGGAGCCAAGAGGCACAGGAAGGTGCTCCGCGATAACATCCAGGGAATCACAAAACCCGCCATTCGCCGTTTGGCTCGCAGAGGCGGCGTCAAGAGAATCAGTGGCCTCATCTATGAAGAAACCCGCGGCGTCCTTAAGATCTTCCTCGAGAACGTTATTCGCGACGCTGTTACCTACACCGAGCATGCTAGGAGGAAGACTGTTACCGCTATGGATGTTGTTTATGCTCTCAAGAGGCAGGGCAGGACTCTCTATGGTTTCGGTGGTTAA 471 0.5159 MNDPRRSSEWVDEKHKWHRFIKLALYNPPHRSVTFKTNSERNSQNQNQKKRAKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1434 156 MobiDBLite consensus disorder prediction 32 74 - -
Gso19g1434 156 CDD H4 71 154 IPR001951 GO:0003677|GO:0030527
Gso19g1434 156 Pfam Centromere kinetochore component CENP-T histone fold 93 149 IPR035425 -
Gso19g1434 156 PANTHER HISTONE H4 37 156 - -
Gso19g1434 156 Gene3D Histone, subunit A 55 156 IPR009072 GO:0046982
Gso19g1434 156 SUPERFAMILY Histone-fold 37 153 IPR009072 GO:0046982
Gso19g1434 156 PRINTS Histone H4 signature 58 69 IPR001951 GO:0003677|GO:0030527
Gso19g1434 156 PRINTS Histone H4 signature 73 92 IPR001951 GO:0003677|GO:0030527
Gso19g1434 156 PRINTS Histone H4 signature 93 113 IPR001951 GO:0003677|GO:0030527
Gso19g1434 156 PRINTS Histone H4 signature 115 129 IPR001951 GO:0003677|GO:0030527
Gso19g1434 156 PRINTS Histone H4 signature 130 142 IPR001951 GO:0003677|GO:0030527
Gso19g1434 156 PRINTS Histone H4 signature 142 153 IPR001951 GO:0003677|GO:0030527
Gso19g1434 156 SMART h44 69 143 IPR001951 GO:0003677|GO:0030527
Gso19g1434 156 MobiDBLite consensus disorder prediction 32 51 - -
Gso19g1434 156 ProSitePatterns Histone H4 signature. 68 72 IPR019809 GO:0000786|GO:0003677
Gso19g1434 156 PANTHER HISTONE H4 37 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1434 Gso-Chr19 43242493 43243203 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1434 K11254 - gmx:100779904 283.493