Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1394 ATGGCCAAATGTTTGGCACTCTCACTAATCATGGCAGGCCTCTTCATTGGCTTGGTGAGTCCACAATGGAACATATTGAACCCAAAATGGGGAAAAAGTGTTGAAGTAGTGAATCGTCCAGAATGGAACATCTTGAATCAAAGATTGAGAAAAGGGGTTGTTGGAGACAACTTGAAGAACTACTGCGAGAGTTGGAGGATAAATGTTGAACTAAACAACATTAGAGGGTTCAGTGTTGTGCCTCAAGAATGTGTGGACCATGTGAAGAAGTACATGACTTCATCTCAATACAATGTTGATTCTGTGAGGGCAGTGGAGGAGATTAGGCTCTACATGAGTGGATTCTGCACTTTAAAAGATGATGGCAAAGATTCCTGGATTTTTGATATTGATGAGACCCTTTTGTCCACAATTCCTTATTATAAGAAGCATGGTTTTGGGGGAGAAAAGCTGAACGTAACATCTTTAGAAGAATGGATGAAGAAAAGCAAGGCACCAGCTCTTGATCACACACTCGAGCTCTTCCATGAAATCAAGAACAAAGGGTTCAAAATCTTTCTGATTTCTTCAAGAAAGGAAAACCTAAGATCTCCCACCGTAGACAACCTTGTGAGTGTTGGATACCATGGATGGACTAGGCTTACATTGAGGGGTTTTGATGATGAATTGGTGGAAGTGAAAAAATACCATTCCATGGTGAGGCAACAATTGGTTGATGAAGGTTACAACATATGGGGTATTGTGGGAGATCAATGGAGCACTTTTGATGGACTTCCAATGGCCAAGAGAACATTCAAACTACCCAACTCCATTTACTATAAAGCATAA 828 0.407 MAKCLALSLIMAGLFIGLVSPQWNILNPKWGKSVEVVNRPEWNILNQRLRKGVVGDNLKNYCESWRINVELNNIRGFSVVPQECVDHVKKYMTSSQYNVDSVRAVEEIRLYMSGFCTLKDDGKDSWIFDIDETLLSTIPYYKKHGFGGEKLNVTSLEEWMKKSKAPALDHTLELFHEIKNKGFKIFLISSRKENLRSPTVDNLVSVGYHGWTRLTLRGFDDELVEVKKYHSMVRQQLVDEGYNIWGIVGDQWSTFDGLPMAKRTFKLPNSIYYKA* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1394 275 PANTHER ACID PHOSPHATASE 1 1 274 - -
Gso19g1394 275 CDD HAD_VSP 88 273 - -
Gso19g1394 275 Gene3D - 58 275 IPR023214 -
Gso19g1394 275 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 59 274 IPR005519 -
Gso19g1394 275 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 1 274 - -
Gso19g1394 275 PIRSF VSP 2 275 IPR014403 -
Gso19g1394 275 SUPERFAMILY HAD-like 117 259 IPR036412 -
Gso19g1394 275 TIGRFAM plant-AP: plant acid phosphatase 57 273 IPR010028 GO:0003993
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1394 Gso-Chr19 42777876 42780612 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1394 - - gmx:100811100 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1394 19 42777876 42780612 Gso3g1401 3 39960224 39963149 GST