Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1384 ATGGAAGGGAGAGAGAGTTGTCACCCATTGCTGAGAGGAGGTAGGAGAAGAGAGGAGAAAGGTTACAACCATGGCTTATCCACCACTCAGATGCATGTCATGGCTGCCATATGTGATGCCCTCATTCCTTCCCTCCCACTCAACAAGGACACTTCACAAGACCAAGCTCTCTCAGACTTCTACAATACCTCTGCTTCTCAGCTCCCTTTTCCTGATGAGGCTGCAGAGCTGTTGTACAAGAGGACTGTGCCAGAAGCGGTGTCGTTGGTGAGTTGGGTTCTGTGGATACTGTCTTTCAGATTGGGGACACTGTTGCTCTGTGGAAGACTTTCCTTGGACTGGAAGTGGCCTTTCATTCGCAAGTTCTCTGAGATTTCCTTGGAGAAGAGAGAACAAATTTTCAGGAACTGGACCAGGGAAAAGAGTTGGGTAGCCTTACGGGTAGTGTTTGTGCTCATCAAACTCTTTTGCTTCTATAATTTCTTCTCAAGGACTGATGCAAATGGGCAAAATCCCACATGGAAAGCAATTGGATACCAAGTGGACACCAAGGAGAAGTTGATCAGAAAGGAGAGGCCTTTGGAAAAGGGATTAATAGAAACAATGTATGAAACTGATTCTACTTTGATCCAATCCCTCACTGAAAAAGGCCTTGAAGTCACTGAAGATAAAAGGCAGAACCTGTACAAGGTCAAATGTGATGTTGTGATTGTGGGGTCTGGTTGTGGTGGAGGAGTTGCAGCTGCAGTTCTTGCAAATTCTGGTCATAAAGTAGTAGTCCTTGAGAAAGGAGAGTATTTTGTTTCACATGATTATTCTTCCCTTGAAGGTCCATCCATGGATGAACAATACGAATCCGGCGGCATTATGCCGAGTCTTGATGGGAAGATGATGATCCTGGCTGGCTCAACAGTTGGTGGAGGCTCTGCTGTAAACTGGTCTGCAAGCATCAGAACACCTGATTCTGTTCTGAGGGAATGGTCTAAAAAATATAAAATTCCACTCTTTGGTAGCTCCGATTACCAATCTGCGATGGACTCGGTGTGCAGAAGGATTGGTGTAACAGAGAAGTGCAAGAAGGAAAGCTTTCAGAACCAAATTCTCATACAAGGATGTGAGAAAATGGGCTTGAAAGTAGAGTCTGTGGCTATAAATTCCTCAGCAGATCACTATTGTGGTTCATGCTGTTATGGTTGCAGAACAGGAGATAAGAAGGGAACTGACTCCACTTGGTTGGTTGATTCTGTAGGCAATGGTGCAGTGATCCTCACTGGATGTAAAGCTGAGAGATTCATACTTGAAAATGGAAAGAATGGAATGAAGAAAAAGAAGTGCTTAGGAGTGATTGCTGCAGCAAGTTGGAGGAGTAAGGTAACAAAGAAACTCCAAATTGAATCCAAGGTAACCATCTCAGCATGTGGCTCTCTCAACACTCCTCCTCTAATGATTTCTAGTGGACTAAAAAATCCAAACATTGGAAGGAATCTCCATCTCCACCCTGTCCAATTTGCATGGGGTTACTTCCCAGAAGACATGACAACAAACTTCAGCGGCAACAACTACGAGGGGGGTATCATAACTTCGATCCACAAGGAATATGCAGAGGATTCCACCCCAAGGTTCATCATAGAAACACCTTCTCTAGGACCAGGATCTTTTTCGGCGTTTGTTCCGTGGCTTTCAGGGCAGGACATGAAAGACAGAATGGCCAAGTACGCAAGAACTGCCAACATTTTCGCATTGATACGAGACCAGGGATCAGGAGAAGTGAAGGCTGAAGGGAGAGTGACTTACAGACTTGACAAAGAAGACAAAGAAAGCCTTAGAGTTGGACTGAGGAAGGCATTGAGGATTTTGGTTGCAGCAGGTGCTATGGAAGTGGGAACATACAGAAGTGATGGCCAAAGAATCAAGTGTAAGGGGATGAAGGAGGAAGATTTGGAGGAGTTTCTTGACACTGTGACAATAGTTGGGGGTCCAAGGTCAAGGAATGAAGTGTGGACAGTGTTTACCACTGCACATCAGATGTCAAGTTGTAGAATGGGTGCCTCTGAAGAAGAAGGTGCACTCGATGAGAATGGTGAGACTTGGGAAGCAGAAGGCTTGTATGTGTGTGATGGGAGTGTTTTGCCTAGTGCAGTTGGTGTCAACCCCATGGTAACCATTCAGTCTACATCTTACTGTATTGCCAGTAAGATTGCAGAATCACTTGGCAAAGCATCAACATATAGTTAA 2235 0.4492 MEGRESCHPLLRGGRRREEKGYNHGLSTTQMHVMAAICDALIPSLPLNKDTSQDQALSDFYNTSASQLPFPDEAAELLYKRTVPEAVSLVSWVLWILSFRLGTLLLCGRLSLDWKWPFIRKFSEISLEKREQIFRNWTREKSWVALRVVFVLIKLFCFYNFFSRTDANGQNPTWKAIGYQVDTKEKLIRKERPLEKGLIETMYETDSTLIQSLTEKGLEVTEDKRQNLYKVKCDVVIVGSGCGGGVAAAVLANSGHKVVVLEKGEYFVSHDYSSLEGPSMDEQYESGGIMPSLDGKMMILAGSTVGGGSAVNWSASIRTPDSVLREWSKKYKIPLFGSSDYQSAMDSVCRRIGVTEKCKKESFQNQILIQGCEKMGLKVESVAINSSADHYCGSCCYGCRTGDKKGTDSTWLVDSVGNGAVILTGCKAERFILENGKNGMKKKKCLGVIAAASWRSKVTKKLQIESKVTISACGSLNTPPLMISSGLKNPNIGRNLHLHPVQFAWGYFPEDMTTNFSGNNYEGGIITSIHKEYAEDSTPRFIIETPSLGPGSFSAFVPWLSGQDMKDRMAKYARTANIFALIRDQGSGEVKAEGRVTYRLDKEDKESLRVGLRKALRILVAAGAMEVGTYRSDGQRIKCKGMKEEDLEEFLDTVTIVGGPRSRNEVWTVFTTAHQMSSCRMGASEEEGALDENGETWEAEGLYVCDGSVLPSAVGVNPMVTIQSTSYCIASKIAESLGKASTYS* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1384 744 Pfam GMC oxidoreductase 595 726 IPR007867 GO:0016614
Gso19g1384 744 Gene3D - 571 736 IPR036188 -
Gso19g1384 744 SUPERFAMILY FAD/NAD(P)-binding domain 232 738 IPR036188 -
Gso19g1384 744 PIRSF Lg_Ch_AO 13 742 IPR012400 GO:0046577
Gso19g1384 744 Pfam GMC oxidoreductase 234 501 IPR000172 GO:0016614|GO:0050660
Gso19g1384 744 Gene3D - 218 527 IPR036188 -
Gso19g1384 744 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 4 741 - -
Gso19g1384 744 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO4B 4 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1384 Gso-Chr19 42671945 42675666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1384 4 737 Acyl Lipid Metabolism Gene Families AT4G28570 58.737 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1384 K17756 - gmx:100808951 1467.21