Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1383 ATGGCGACGGCGGGGTTGTATCGACGCCTTCTTCCTTGTCCCCCCGCCGTCGAATTTGCTTCTTCACAAGGCAAGAAACTATTTCTTGAATCCATTCAGAATGGAACCATGGAAGGCTTCTACAAGTTGGTTTCCTATTTCCAAACGCAATCCGAGCCCGCCTTTTGCGGCCTCGCCAGCTTGTCCATGGTCCTCAATGCTCTTGCCATTGATCCTGGCAGAAAATGGAAAGGTTCTTGGAGATGGTTTGATGAATCTATGTTGGACTGTTGTGAGCCTCTAGAAACGGTCAAGGCTAGAGGCATCACGTTTGGGAAGCTTGTGTGTTTAGCTCATTGTGCCGGAGCAAAAGTTGAAGCCTTTCATGCTAGCCATAGCAGCATCGATGATTTTCGTAAATATGTTATCAAGTGTTCGATGTCCGATGACTGTTACGTAATCTCATCGTACCACAGAGCTGCCCTCAAACAAACGGGAATTGGTCACTTTTCTCCTATCGGAGGGTATCATGTTCGAAGGGACATGGCACTTATTTTGGACGTTGCACGATTTAAGTATCCTCCTCATTGGATCCCACTTAAACTTCTTTGGGAAGGCATGAATTATGTAGATGAGGATACTGGACAATCTAGGGGGTTCATGCTTGTATCAAGGCCTCACAGGGAACCTGGATTGCTTTACACTCTGAGCTGCAAACATGAGAGTTGGATTAATATTGCAAAATTCCTAATGGACGATGCTCCTCTTCTGTTAAAATCAGAGGATGCGAAAGACATCCATCAGGTTATTTCAATTATAGTCGCATCACTGCCATCTAATTTTGAAGAATTCATCAAGTGGATTTCAGAGATCAGGAGGCGAGAGGATGGTGGTCCAAGTTTAAGCGCAGAGGAGAAAGCAAGGCTTGCTATCAAGGAAGAGGTATTGAAACAGGTGCAGGAGACTGGGCTTTTCAAACATGTAGCTTCCTTTTTGGCAAGTTCTTGCAGCAGACAAGCATCAGGTGATGGAGACACATTACCTTTCATTGCTGCAAGTGTTTGTTGCCAAGGAGCAGAAATTTTAGGGGGGAAACCTAGCTCATCAGGGTATTGCTGTCGAGAGACATGTATGAAATGCTGGAAAGCCGAAGATGACAAGCCAATAACAATGGTTTCGGGGACTGTGGTAAATGGTAACACTGAGCAAGGGGTTGATGTGTTGATTCCTTCATCATCTGGGAAATTATGTTGCATTTGCTCTAAAAGTAAGTACATAAGGGTGCACCCAGCTAGCACTGATGTGCTAACAGTGCTTCTGCTGTCCTTACCATCTACAACATGGGCTGGCATCACAGATGAGCAGCTTTTGACAGAAATACACGGTCTGGTTTCAATTGAAAATCTTCCTACTTTGCTTCAGGAAGAGGTTTTGCACTTGAGACATCAGCTACACCTTCTCAAGAGATGTCAAGAGGGTAAGGTAGACGAGGATCTTGGTGCTCCTCTCTCTTGA 1494 0.4511 MATAGLYRRLLPCPPAVEFASSQGKKLFLESIQNGTMEGFYKLVSYFQTQSEPAFCGLASLSMVLNALAIDPGRKWKGSWRWFDESMLDCCEPLETVKARGITFGKLVCLAHCAGAKVEAFHASHSSIDDFRKYVIKCSMSDDCYVISSYHRAALKQTGIGHFSPIGGYHVRRDMALILDVARFKYPPHWIPLKLLWEGMNYVDEDTGQSRGFMLVSRPHREPGLLYTLSCKHESWINIAKFLMDDAPLLLKSEDAKDIHQVISIIVASLPSNFEEFIKWISEIRRREDGGPSLSAEEKARLAIKEEVLKQVQETGLFKHVASFLASSCSRQASGDGDTLPFIAASVCCQGAEILGGKPSSSGYCCRETCMKCWKAEDDKPITMVSGTVVNGNTEQGVDVLIPSSSGKLCCICSKSKYIRVHPASTDVLTVLLLSLPSTTWAGITDEQLLTEIHGLVSIENLPTLLQEEVLHLRHQLHLLKRCQEGKVDEDLGAPLS* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1383 497 Gene3D - 16 220 IPR038156 -
Gso19g1383 497 PANTHER BNAA02G22480D PROTEIN 1 495 - -
Gso19g1383 497 Pfam Phytochelatin synthase 7 213 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Gso19g1383 497 Pfam Domain of unknown function (DUF1984) 231 477 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Gso19g1383 497 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 221 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Gso19g1383 497 SUPERFAMILY Cysteine proteinases 14 217 IPR038765 -
Gso19g1383 497 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 1 495 IPR040409 GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1383 Gso-Chr19 42656177 42659677 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1383 K05941 - gmx:100808418 984.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1383 19 42656177 42659677 Gso3g1389 3 39846849 39852410 GST