Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1381 ATGAACATCTTCACCAAGAAACCCACGGCCAAAGAGGCTCTCCGTGATAGTAAACGACAAATGACAAACGCCACTAGAGGAATAGAAAAGGAAATTGGAGCTCTACAATTGGAAGAAAAAAAGCTTGTTGCTGAGATAAAGAGAACTGCTAAGACGGGAAATGAGGCAGCAACTAAAATTCTAGCTCGCCAGTTGATCAGGCTTAGACAACAAATTGCTAATCTTCAAGGTAGTCGAGCTCAGATGAGAGGCATAGCAACTCACACACAGGCCATGCATGCACATTCTTCTGTTGCTGTTGGCTTGAAAGGTGCTACTAAGGCAATGGTAGCTATGAATAAGCAAATGGAACCAGCAAAGCAAGCTAAAATTATACAAGACTTCCAGAAACAATCAGCACAGATGGATATGACTACTGAAATGATGTCAGATGCCATAGATGATGCCTTGGATAATGATGAAGCTAAAGAGGAGACTGAAGAGCTGACAAACCAGGTGCTCGATGAAATTGGTGTAGATGTTGCCTCACAGTTATCAGCAGCTCCCAAAGGGAGAGTCGCAACAAAGAATGCTGAAAATGTTAGCAGCTCGGGCATTGACGAACTTGAGAAGCGTTTGGCAGCTCTTAGAAACCCATAA 639 0.4319 MNIFTKKPTAKEALRDSKRQMTNATRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVGLKGATKAMVAMNKQMEPAKQAKIIQDFQKQSAQMDMTTEMMSDAIDDALDNDEAKEETEELTNQVLDEIGVDVASQLSAAPKGRVATKNAENVSSSGIDELEKRLAALRNP* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1381 212 Gene3D - 4 181 - -
Gso19g1381 212 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 2 212 IPR005024 GO:0007034
Gso19g1381 212 Pfam Snf7 17 185 IPR005024 GO:0007034
Gso19g1381 212 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 3 2 212 - -
Gso19g1381 212 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1381 Gso-Chr19 42643911 42647213 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1381 K12192 - gmx:100306343 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1381 19 42643911 42647213 Gso3g1386 3 39827646 39831910 GST