Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1334 ATGCCTTTCACAATGAAGATTCAGCCGATCGATTCGCCCGTGCCGGAGGAGGCTACTCGGCTTGAGCCGGTGAAGCCGGCGGTGAGGTCGCGCCTGAAGCGCCTCTTCGAGCGCCAGTTCTCCGGCGTCCTCAGGAACTCATCGGCGGCGGAGAAGATCGCCTACCCCGCCGAGGAGCCGCCGCATTCCGCCAAAGACGGCTCCGCTGATTTCGAGCCGAGCTCGGTGTGTCTGGCGAAAATGGTGCAGAATTTCATGGAAGAGAATCACGAGAAGCACTCTGTTTCCGTGAAGTGCGCGCGCAGCCGCTACAATAGCTTCGACGACGCCTCCGACGCCGAAACGCACTCGCTTTTCGGCGAGTCCAATTATTCTTTCTCCGGCGAAACACAAGAAATCCTCAAGGATTTGGTGACATGTGCGAGTGTCAGTGAAAGGAATTTGCTAGCGGACACTACAAAGATCATTGAGAAGAATAAAACAACGTGCAAACGCAAAGACGATTGTTGCAGAAAGATCGTTACTGAAGCGTTGTTAGCTCTCGGATACGACGCTTCCGTATGCAAATCTCGCTGGGAAAAATCAACTTTCTGTCCAGCTGGGGAATATGAATACATTGATGTGATAATGGGAAAGGAGCGGGTGGTGGTTGACGTTGACTTCAGATCAGAATTCGAGATAGCTCGACCCACCAAGACCTACAAAGCGATCCTCCAAACGCTGCCTTACGTATTCGTTGGCACGTGCGAGCGGTTGCAGAGTATCGTGGCCATCGCTTCAGAGGCGGCGAAACTGAGTCTGAAGAAAAGGGGCATGCACGTTCCGCCGTGGAGAAAAGTCGAATACGTCACCGCGAAATGGCTCTCCCCTTACACGTGCTCGCGCGGGGTGAAAGAGGAAACAGAAGAGAAAGAGCACCTTGCGAAAGAGTTGGTGGTGTTATCAACTTCGTGTGGAAGTTTCCGTGAAGATGATGAAAAGTCAAAGTCAAAACTCGTGGTTCAGAATCAGAAGCCACCGGAGATGAAACCCAAAAGTTCTCAGTCCGGTTTGGCAGCTGTGTTCCTAGAAAACCCAAAATTTTGA 1086 0.5212 MPFTMKIQPIDSPVPEEATRLEPVKPAVRSRLKRLFERQFSGVLRNSSAAEKIAYPAEEPPHSAKDGSADFEPSSVCLAKMVQNFMEENHEKHSVSVKCARSRYNSFDDASDAETHSLFGESNYSFSGETQEILKDLVTCASVSERNLLADTTKIIEKNKTTCKRKDDCCRKIVTEALLALGYDASVCKSRWEKSTFCPAGEYEYIDVIMGKERVVVDVDFRSEFEIARPTKTYKAILQTLPYVFVGTCERLQSIVAIASEAAKLSLKKRGMHVPPWRKVEYVTAKWLSPYTCSRGVKEETEEKEHLAKELVVLSTSCGSFREDDEKSKSKLVVQNQKPPEMKPKSSQSGLAAVFLENPKF* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1334 361 PANTHER RNA POLYMERASE SUBUNIT BETA-BETA PROTEIN, PUTATIVE (DUF506)-RELATED 25 354 - -
Gso19g1334 361 Pfam PDDEXK-like family of unknown function 80 292 IPR006502 -
Gso19g1334 361 PANTHER OS03G0796600 PROTEIN 25 354 IPR006502 -
Gso19g1334 361 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 171 292 IPR006502 -
Gso19g1334 361 MobiDBLite consensus disorder prediction 321 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1334 Gso-Chr19 42047671 42049803 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1334 - - gmx:100796711 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1334 19 42047671 42049803 Gso2g1185 2 14773659 14775893 PCT
Gso19g1334 19 42047671 42049803 Gso10g0266 10 2819025 2821136 PCT
Gso2g1185 2 14773659 14775893 Gso19g1334 19 42047671 42049803 PCT
Gso10g0266 10 2819025 2821136 Gso19g1334 19 42047671 42049803 PCT