Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1316 ATGTCGTCGTTGATAACAGATTTGCTCCGTCAAACCGGCGGCACCGCCGTCATCGACGGCGGTCTGGCGACGGAGCTGGAGCGCCATGGCGCCGACCTCAATGATCCTCTTTGGAGCGCCAAGTGCCTCTTTTCCTTCCCTCACCTCATTCGCCAAGTGCACCTTGATTACCTGGAAAATGGTGCAGACATTATAATCACAGCATCTTACCAAGCCACCATTCAAGGGTTTAAAGCCAAAGGCTATTCTGATGAAGAGAGTGAAGCCTTGCTCAGAAGCAGTGTTGAAATTGCACGGGAGGCACGCGAAGTTTACTATAAAAATTGTGCTGGATGTCGTTCGGGTGATGGGGATGATGATGGTAGAATCCTCAAACAACGGCCTATCTTGGTTGCTGCATCAGTAGGGAGCTATGGGGCTTATTTGGCCGACGGGTCAGAGTACAGTGGGGATTATGGTGATGCTATCACGGTGGAAACTCTTAAAGATTTTCATCGGAGAAGAGTTCAAATTTTAGCAGATTCAGGTGCTGACCTGCTTGCATTTGAAACAGTTCCCAATAAGCTTGAAGCTGAGGCTTATGCTCAGCTTCTGGAAGAAGAGGACATAAAAATTCCTGCATGGTTTTCTTTTAACTCTAAGGATGGAGTTAATGTTGTTAGCGGTGATTCTTTAATGGAATGTGGCTCTATTGCTGAATCATGTAATAAAGTTGTCGCTGTTGGAATCAACTGTACTCCACCAAGATTTATTCATGGTCTGATTGTTTTGCTTAAGAAGGTGACTACAAAACCAATTGTTATATATCCAAACAGTGGGGAAACTTACGATGCTGACCTAAAGGAGTGGGTGCAAAATACTGGTGTTACAGATGAAGATTTTATCTCATATGTAAATAAATGGTGTGAGTTAGGAGCTTCCCTTGTAGGTGGCTGTTGCAGAACGACTCCGGATACTATTAGGAAGATATACAGGACCCTGTCTAGCAGTCAATCAATCTAA 1002 0.4471 MSSLITDLLRQTGGTAVIDGGLATELERHGADLNDPLWSAKCLFSFPHLIRQVHLDYLENGADIIITASYQATIQGFKAKGYSDEESEALLRSSVEIAREAREVYYKNCAGCRSGDGDDDGRILKQRPILVAASVGSYGAYLADGSEYSGDYGDAITVETLKDFHRRRVQILADSGADLLAFETVPNKLEAEAYAQLLEEEDIKIPAWFSFNSKDGVNVVSGDSLMECGSIAESCNKVVAVGINCTPPRFIHGLIVLLKKVTTKPIVIYPNSGETYDADLKEWVQNTGVTDEDFISYVNKWCELGASLVGGCCRTTPDTIRKIYRTLSSSQSI* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1316 333 PIRSF BHMT 5 112 IPR017226 GO:0008168|GO:0008270|GO:0009086
Gso19g1316 333 PIRSF BHMT 267 333 IPR017226 GO:0008168|GO:0008270|GO:0009086
Gso19g1316 333 SUPERFAMILY Homocysteine S-methyltransferase 9 329 IPR036589 -
Gso19g1316 333 PANTHER HOMOCYSTEINE S-METHYLTRANSFERASE 2 2 331 - -
Gso19g1316 333 Gene3D - 5 325 IPR036589 -
Gso19g1316 333 PANTHER ZGC:172121 2 331 - -
Gso19g1316 333 Pfam Homocysteine S-methyltransferase 17 325 IPR003726 -
Gso19g1316 333 ProSiteProfiles Homocysteine-binding domain profile. 4 327 IPR003726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1316 Gso-Chr19 41850843 41855619 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1316 K00547 - gmx:100790567 649.432