Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1309 ATGTTACAAATGGAGACACTCGTTGTTGTGGCGCAGCATAGGAACCAATGTTACACCAGGCCGAAACCCCAAGGTCACGCTGAGTTTGGTTCCTCTTCACATTCAAGAGACTTTAGGGCCATAAATTGCAGAAGTTTCCAAACGGGATATGGTGTTCTACCTACCCCACTCAAACGCCCCAAAACGCCGTTAACTCCTTCAAACCCTAACAAAACCCGTTGCAAAACCACCCCCAGTAGCGCCCCGGTTCCTATCAACCACAAAAAGGAGAAGAAGGGTTTCAATGTTGTTCCTAATGGGGGCATTTTGCTCTCTGAACTTTGGGCCGGGCCCACATACTCGAGTTCTCCACCGCCAAGTTCGTTGCCTATTCCGAAATTTTCAGTGAGACCTAAGAGGAGTGTGTCACTTGATCTCCCTGGTTCTTGCCGTGAAGTTGAAATGCCGTTACGTGCTAACTCTGCGCCGTCCTCCCCTCGCGGGGAGCATTCTCCTTGTGCTAGAGATGGTCTCTTTGATTCGGCGACGAACACGCTGCGTCGCATCCTTAATCTTAATTTGGATGATGAATGA 573 0.4956 MLQMETLVVVAQHRNQCYTRPKPQGHAEFGSSSHSRDFRAINCRSFQTGYGVLPTPLKRPKTPLTPSNPNKTRCKTTPSSAPVPINHKKEKKGFNVVPNGGILLSELWAGPTYSSSPPPSSLPIPKFSVRPKRSVSLDLPGSCREVEMPLRANSAPSSPRGEHSPCARDGLFDSATNTLRRILNLNLDDE* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1309 190 PANTHER - 3 190 - -
Gso19g1309 190 Pfam Proline-rich nuclear receptor coactivator motif 108 127 - -
Gso19g1309 190 Coils Coil 189 190 - -
Gso19g1309 190 PANTHER BNAA03G57290D PROTEIN 3 190 - -
Gso19g1309 190 MobiDBLite consensus disorder prediction 149 171 - -
Gso19g1309 190 MobiDBLite consensus disorder prediction 52 86 - -
Gso19g1309 190 MobiDBLite consensus disorder prediction 64 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1309 Gso-Chr19 41775349 41776786 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1309 - - gmx:102663401 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1309 19 41775349 41776786 Gso3g1311 3 38956546 38959039 GST
Gso19g1309 19 41775349 41776786 Gso2g1210 2 15091053 15093599 PCT
Gso19g1309 19 41775349 41776786 Gso10g0242 10 2502322 2504896 PCT
Gso2g1210 2 15091053 15093599 Gso19g1309 19 41775349 41776786 PCT
Gso10g0242 10 2502322 2504896 Gso19g1309 19 41775349 41776786 PCT