Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1295 ATGGAGCCACGTGTACTCAGGCTCAAACTCGCACTACAACAAGGTTCCAATTTTCCTCAACCCTCTCCCTCTCCCACTACCAACACATTTTCACTTTCACCCCTCTCTGACTCCGAAGAAAACCCACCTACCAACTGCCAATGTGACAAAAATGACACAAAATCCGGCGAGCCTAGTGGCTGGAGTTTCCTTCAAACTCTCTCACAGGACAAAACAGAGGACCAAGTCTATGTCCACCCCACAGTTAAACGTTCCTCCTCAATTCTCAGTGAAAAAAGCTTAGAAATGTGCACCGAAAGCCTCGGCAGCGAGACCGGTAGCAATGCCAGTGAAAATGGTGATGACATGTCCTTGTTTTCCTTTGACACCAACACTCGTTCCACCGAACATACTACTACTACTACTGCTACTCATGCAAATTATGAGTCTAAAAGAGTGAACCGCACTTGCAACTTGCCACCACCACTGACCACAATCACTGATTTTGGCGGTGTTCATGTTCGACCTCATCGCGAAGGTGGAAGGCTAGTATTGGAAGCTGTAGCTTCTCCTTCCCCTCGTCCATATTTTCACATAGAGCGCGGCGATGGAAGGCTTAGGCTGTGTTTGCTTGAGAGCTTTTCGGCCTCGGATAGTGATGATGAAGTTTGTGATGCTGAGGAAGGTGTTGATGAACAACAGGAAGAAGAAAATGAAAGTGAGAAGAACAGAGGAGAAGAAGAAGAAAAGGAGTGTGGTGAAGAGGATATTGCTACTGGGGCAGAGGAGGAGGAGGAGGAAGAGTGTGTTGAGAACGTGGAGGATGGGATGGGAGTGAAAAAGTTGGCGAGACCAAGCAGGTGCAAGGAAAGTGGGAAAAGAGATATTTTTGGTGATGCCTTGGCTAATTTGAGCTTCCCTCGTTTTCTCTCTGTCTCCGAATAG 924 0.474 MEPRVLRLKLALQQGSNFPQPSPSPTTNTFSLSPLSDSEENPPTNCQCDKNDTKSGEPSGWSFLQTLSQDKTEDQVYVHPTVKRSSSILSEKSLEMCTESLGSETGSNASENGDDMSLFSFDTNTRSTEHTTTTTATHANYESKRVNRTCNLPPPLTTITDFGGVHVRPHREGGRLVLEAVASPSPRPYFHIERGDGRLRLCLLESFSASDSDDEVCDAEEGVDEQQEEENESEKNRGEEEEKECGEEDIATGAEEEEEEECVENVEDGMGVKKLARPSRCKESGKRDIFGDALANLSFPRFLSVSE* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1295 307 Pfam Fantastic Four meristem regulator 151 203 IPR046431 -
Gso19g1295 307 MobiDBLite consensus disorder prediction 213 229 - -
Gso19g1295 307 PANTHER DUF3049 FAMILY PROTEIN 1 286 - -
Gso19g1295 307 Coils Coil 223 244 - -
Gso19g1295 307 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 1 286 IPR021410 -
Gso19g1295 307 MobiDBLite consensus disorder prediction 243 265 - -
Gso19g1295 307 MobiDBLite consensus disorder prediction 213 265 - -
Gso19g1295 307 MobiDBLite consensus disorder prediction 13 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1295 Gso-Chr19 41534946 41535869 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1295 - - gsj:114398842 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1295 19 41534946 41535869 Gso2g1223 2 15227369 15228702 PCT
Gso19g1295 19 41534946 41535869 Gso10g0229 10 2381821 2383226 PCT
Gso2g1223 2 15227369 15228702 Gso19g1295 19 41534946 41535869 PCT
Gso10g0229 10 2381821 2383226 Gso19g1295 19 41534946 41535869 PCT