Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1292 ATGGAAGCAACGCGATTCTCCCCTAATCACTTCTATCCACACTGCTTCCTTACCAAACCCAACGCACTCAGAGAAAGAAGATACGTAAAATGCATCAACGGAGTTGGAACTAGGGTTTACCTTTTCACAAACCCCGCATTCAACAACGCACCGAACCGGTCTTTGTTTCCGAAGCTGAACCGGACTCTCTCTGTTAGCTTCTCCGACCGGCTCCGAGATGATTATGTGCGCGTCGATGCTCCGAGGAGCAAGGAAGTTGTTCCGGCGACACGCGGCGGCGATGGAGGGGAGGCGATTCTTGCGTCGTCTCCGAGTGCTGACAACTCGGGAACCCTGCAACTGAAACCATTGATGTTCAGGAACAGGTTTCTGAACTTTGCGCGATTGGGTTCTGTGATTAACGGCGCCGCGGAATCGTTTTTCAAGAGCGAGATTCGGAGGAGGCTGTTCGTAACGGCTGTGTTAATTGTGATTAGTCGCGTTGGCTATTTTATTCCTCTTCCGGGGTTTGACAGAAGGTTGATACCGGAAGACTACTTGAGCTTTGTCGCAGGATCATCTGTTGATGAACTTGGTGACTTCACTGCTGAGCTCAAGCTATCTATTTTCCAGCTTGGGATCAGTCCTCAGATAATCAATCGCGTCCATTATTGTGCAGATGGTGGATGTCATTTGGCTTTGCAATTTTGGAAGCTTTAA 699 0.4921 MEATRFSPNHFYPHCFLTKPNALRERRYVKCINGVGTRVYLFTNPAFNNAPNRSLFPKLNRTLSVSFSDRLRDDYVRVDAPRSKEVVPATRGGDGGEAILASSPSADNSGTLQLKPLMFRNRFLNFARLGSVINGAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPEDYLSFVAGSSVDELGDFTAELKLSIFQLGISPQIINRVHYCADGGCHLALQFWKL* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1292 232 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC 123 214 - -
Gso19g1292 232 Gene3D SecY subunit domain 133 215 IPR023201 -
Gso19g1292 232 PRINTS Preprotein translocase SecY subunit signature 149 167 - -
Gso19g1292 232 PRINTS Preprotein translocase SecY subunit signature 200 220 - -
Gso19g1292 232 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 123 214 IPR002208 GO:0015031|GO:0016020
Gso19g1292 232 SUPERFAMILY Preprotein translocase SecY subunit 129 211 IPR023201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1292 Gso-Chr19 41492465 41498228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1292 53 232 Miscellaneous Gene Families AT2G31530 52.174 1.96e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1292 - - gmx:100781502 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1292 19 41492465 41498228 Gso3g1292 3 38656647 38666818 GST