Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1280 ATGTTGTTGCATGAGCTGAACCTTGGTATGAGGGAGTTCCAACCAGGGAACTTCGTGTACGATGCTGAGGATATTCCATTTGGGACGCTGTGGTGGTTCTTTTATGCTGGAATCTCTTGTTTGCTCGTTCTATTCGCTGGGATCATGTCTGGTCTCACCCTTGGATTAATGTCTCTGGGTCTCGTTGATCTTGAGATTCTCCAACAGAGTGGCTCCTCCACTGAGAAGAAACAAGCTGCTGCTATTTTGCCGGTTGTACAGAAACAGCATCAGCTTCTTGTGACCTTGCTTCTTTGTAACGCCTGTGCCATGGAGGCACTTCCAATTTACCTTGACAAGATTTTTCATCCCTTTGTAGCAGTAGTGTTATCTGTGACTTTTGTTCTAGCTTTTGGAGAGGTTATCCCACAAGCTATATGCACAAGATATGGACTCTATGTTGGTGCTAATTTTGTGGGGCTTGTGCGTGTCCTGATGATCATCTGTTATCCAATTGCTTACCCTATTGGAAAGGTTCTGGATGTTTTACTTGGACACGATCATGCACTGTTTAGGCGAGCACAGCTGAAAGCCCTTGTTTCAATCCATAGCCAAGAGGCTGGTAAAGGAGGTGAACTCACTCATGATGAGGCAACAATTATCAGTGGAGCACTAGATCTCACAGAGAAGACTGCAGAGGAGGCTATGACACCAATTGAATCTACATTTTCCTTGGATGTTGCTTCCAAATTGGACTGGGAAGCAATTGGGAAAATTCTTGCACGAGGTCATAGTCGTGTTCCTGTATACAGTGGAAACCCCAAAAATATAATTGGCCTCTTACTAGTAAAAAACCTTCTTACTGTAAGAGCTGAAACAGAGACTCCAGTTAGTGCTGTTTCCATCCGGAGAATTCCTAGGGTTCCAGCAGATATGCCTCTATATGATATCCTCAATGAGTTTCAAAAAGGAAGCAGTCATATGGCAGCTGTAGTTAAGGTTATAAGAGAGAGAAACAACCCTCAGTCACCCAATGACACTGAGAAATCCAAGGATAAGGAAGTCATCAAACATAATTCTCAACTAACTATCCCATTGCTATCCAGGTTTTATGAAAAATCAGAAAATGTTGTCAATATTGACAAACCCAAGCTTGCTGCAGACCAACAGTTTCAAAAGGATGGCCCTGCAACAAATGGTGTTTACCACTCTCTTGACAATGCTGAAGATGGGGAGGAAGTTATTGGCATCATTACGCTGGAGGACGTGTTTGAAGAACTCCTGCAGGAAGAAATTGTGGACGAGACTGATGTGTATATAGATGTACATAGAAGGGGAATTAAGCAAGCGAGTGAAAGTTTGACAAAGTTTGTGGAGAATGATTTACATTTAAGAAGAATTTCATTTCAGGATCATTGA 1398 0.4249 MLLHELNLGMREFQPGNFVYDAEDIPFGTLWWFFYAGISCLLVLFAGIMSGLTLGLMSLGLVDLEILQQSGSSTEKKQAAAILPVVQKQHQLLVTLLLCNACAMEALPIYLDKIFHPFVAVVLSVTFVLAFGEVIPQAICTRYGLYVGANFVGLVRVLMIICYPIAYPIGKVLDVLLGHDHALFRRAQLKALVSIHSQEAGKGGELTHDEATIISGALDLTEKTAEEAMTPIESTFSLDVASKLDWEAIGKILARGHSRVPVYSGNPKNIIGLLLVKNLLTVRAETETPVSAVSIRRIPRVPADMPLYDILNEFQKGSSHMAAVVKVIRERNNPQSPNDTEKSKDKEVIKHNSQLTIPLLSRFYEKSENVVNIDKPKLAADQQFQKDGPATNGVYHSLDNAEDGEEVIGIITLEDVFEELLQEEIVDETDVYIDVHRRGIKQASESLTKFVENDLHLRRISFQDH* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1280 465 Pfam Cyclin M transmembrane N-terminal domain 38 209 IPR002550 -
Gso19g1280 465 Gene3D - 210 342 IPR046342 -
Gso19g1280 465 SUPERFAMILY CBS-domain pair 214 422 IPR046342 -
Gso19g1280 465 CDD CBS_pair_CorC_HlyC_assoc 224 325 IPR044751 -
Gso19g1280 465 PANTHER BNAC05G01850D PROTEIN 14 439 - -
Gso19g1280 465 Gene3D - 343 428 IPR046342 -
Gso19g1280 465 ProSiteProfiles CNNM transmembrane domain profile. 28 210 IPR002550 -
Gso19g1280 465 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 14 439 IPR045095 GO:0010960
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1280 Gso-Chr19 41381362 41387733 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1280 K16302 - gmx:100777230 856.284