Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1279 ATGCCGCCTAGTCGTAGAAAGGGCGGAAAGAAAAGCGCCGGCGGTGCCGCCGCCTGCCGGCAGTTTAAGCTCGGCGATCTCGTGCTCGCTAAGGTTAAGGGGTTCCCTGCTTGGCCTGCGACGGTGAGTGAGCCGCAGAAGTGGGGTTACTCTGCTGATCGGAAGAAAGTATTTGTTTGCTTCTTTGGAGCCGCCCCACAAATAGCTTTCTGCAATCCTGCCGATGTTGAAGTATTTACTGAAGAGAAGAAACAATCTCTTGCCAAACGTCCAGGAAGAGGTGGTGAATTTGCTCGTGCAGTAAAGGAGATTATTGAATGTTATGAAAAATTGAGGACTGAGAATCAGGATGGTGACACAGGGTCAAAGGAGCAGATGGATGAGTCATATTCACCTGATCCATCTGCCAACACAGGGGCAAAGGAGCAGATGGATGCTCCTTTCACAATTAATTCACAAATGAAATCTTCAAATTGTGTGATTGACAGACCTGAGGATGCTGTTGCATTGAAGGATGAATCTTATAATATAGAAGCATCATTGGAGGAAGCTACTGATAATGCTATTATGACTGCAACTGTAAAATCACTTTTTTCAACAACCCAGAGAAATGCACCAGTTCAAAGGTCTAGAAGCACATTACAGGTCCAAAACTTTGTTTTACCTTATAGTGATGGTGGAAATAATGGCAGCAATAGTAATGACAACATATCAGCTGATGCAATTGAGGATACATCTATAAGAAGGAGAAAACATATCAGGAAATCACCTGACCTTTTAGGTTGTGATGATACTGATTCACCTGCATTTGCTCCAAATGTTAGCATGGAGGACAATGGTTCTGAAATTATTACAATCATTTCTGATGCCTTCACTTTAAATGAGGGAAGTACGATAGATTCTAATTTAAAACTTGAACAGTCTGAGCCTATTGAGTGCCCTGAAGGTGAAGATGATTTGAACAAAGGTCTTGATCTAGAAATAAAGGCTGTAATCAACAAGAAGAAAAGAAAACCAAACCGGAAAAAGGAAACTAATGATTCTGGTGCTCAGAATGCCAGCCAAAGTTTGCAGAATATGGGTGGAAATTCTAAAGAAAGATGCCCTGATCAAGATGGAGATGAACACTTGCCCCTGGTGAAACGAGCTAGAGTTAGAATGGGTAAATCATCCGCAGAGGCAGAACTCAATAGCATTGCACAAGTTCAGGTTAAATGTGGCGAGGAAGATATTACTGACTCACCACATCAGATAATCACATCCTCAAATTGTGAAAATGGTAGCCTTGCTGAAGGAGGCACATCAGTGTTGAATAGTGCTTTGGTTAGTGTTTCTCCTTCTAACTTAATAGCTCTGTGTTCTGAAAATGGGTCTCAGATTTGTAAAATTAAAAAGGACCAAATGTTTGGCTGCTCTGTGGATGATGAAGCTGCTTTACCTCCATCTAAACGCATCCATCGTGCTTTAGAAGCAATGTCTGCCAATGCTGCTGAAGAAGGTGAAGCTTGCATGGAATCCTCCTCTATAATGACATCAAGTGGTAGATGCTGTATATCTACCATTAAGAGATGTCCTTGTATGACCGTTAACAATCAAGGAGGTAATGATTTAGAACTGCAAAGGTTGGATTCTTGTGGCATTGATTCATCTCATGTTAGTATGTATAGTTTCTCAACTCGTTCGAATACAATTATTTCCACAGAGAATGAGTCATCTACAGAAGTGGATAAGCATTTGGCCAAGTTCCAATGTGAAACTGGGAAGGATGTCATCCCAGGTGATAGACAGCAAGGTGGTGAAGATCTTAGTGATTCTGTTGTCTGTCATCCTGCCAAAATAGATTCACAAATACAATCACATGGAAAAATTTCTCCTGATCTTGATGTAAAATGTTGCCAAGTTGGAAACAGTAAGGATTCACCATGTCCATCATTGTTACCAAATGGTGATTACAATGTCAGACCTTCAAACCATTCAGATGCATCTGATACATTAGAGCATGGTGGAATAAGTCTTGATCCTGTGGCAGGTGACGGTGAAAGTGATAAATTGGTACCTCAAAATAGTATTAATGTGCCACAGAATGTGGTGGTTGCTTGTGAGGATATGGGGAAGCAAGCAGTTGGTGGCAGCAGCAAAATTAATGACACGCATGAGGTTGTCAAAGAGGTAAAATTTAAAGGACAAGAGGAGGATATGAATTCTGTTTCAATATCAAATGATTATTCAGGTGAAAAGGGTAATTTGGTCATTCTGTCAAGTCCATCCTTGACTGATGGGAGAGTTTTCCTTCCACTAGGTTCACCTCCAAATACATCAGTTTGCAATATTTCTACATCAGACAGTAGTAATATCCTTCAAAATGGAAGTTGTAGCCCTGATGTACACCAGAAGAACACTTTATCTGGTCCTACTGATGGATGGAAAGATGGGATTGTGGAAAATGGACGATCAAGATCTGTGGGCAAGTCAACTGAAGCAGGAGATGCTGCATTGTTGTACTTTGAAGCAACGCTTAGGACATTGAAAAGGACAAAGGAAAGTATTGGTCGAGCAACACGCATAGCTATTGACTGTGCAAAGTTTGGCATTGCAACTAAGGTGATGGAAATTCTTGTCCATGATCTGGAAATTGAGTCAAGCCTGCATCGGAGGGTGGATCTGTTTTTTCTTGTTGACTCTATTGCTCAATGTTCTCGAGGGTTGAAAGGAGACATTGGTGGAGTATATCCATCTGCTATGAAAGCAGTCCTGCCACGCCTCTTGTCTGCTGCTGCCCCTCTGGGAAATGCTGCAAAAGAAAATCGTAGGCAGTGTCTTAAGGTATTAAGACTGTGGTTGGAGAGAAAAATCCTTCCTGAACCCATTATTCGGCATCATATGCAGGAACTAGACTCGTATAGCAGTTCAGTTTCTGCAGGTGTCCACTCACACCGTTCTTTAAGAAGAGACAGGCCTTTTGATGACCCTGTTAGAGACATGGAGGGTATGCTTGATGAATATGGAAGCAACTCAAGTTTTCAGCTACCTGGATTTTGCATGCCCCGAATGCTTGGAGATGGAGGGAGTGATTCTGATGGAGGGGAGTTTGAGGCTGTCACACCTGAACATGATTCTGAAACATATGAAGTGCAAGAAACAACTCATGCAATTGAAAAACGCAGGCATGTGTTGGAAGATGTTGATGGTGAGCTTGAAATGGAAGATGTGGCTCCGTCTGTTGATGGTGAATTGAATTCGATTTGTAATATTGATAGAGGAAATGCCAGAGAGTTTGAGAAGAATCTTCCTGTGTCCTTTGGCCCCCCTTTACCCCAGGATTTGCCACCGTCCTCCCCACCTCCACCATCATCCCCTCCACCACCACCACCACCACCTCCTCCTCCTCCTCCATCTCTACCTCTACCTCCACCCCCACCTCCTACATTGCACTTCAAGTCAGCTACCTCTGATCAATATCATGTTGCAGTTGATTCAAAAGGTTTTGAAGATTCATTGACTGTGAAAGCCAATGTACTCCATCCAATGGCCGAGCCCTTAGCTGCACCAAGAAATAGTCAACCTATCAGTGACGCAGTGCAGTATACAGTCCCTGAATGTAGAGACATGCCAATGCAGATGCCAGAGTCTACTTGCTCTTTCAACACTTTCCCTGTACAACCAACAGACAATTCCAGGAATACTGATGGTGCTACTATGCATAATAAAGGTTACTTGATACCACCACCTCACCATGTGCCATCCAATCAGTTTTCTTTTGTTCATGGGGAACATCGTATGAAGCCACAAAGGGAGGTTCCGCCACCCCCTTCATATTCCAATGGGCACCACTTTATGCCAAGCATGACGAGAGAGTATGGTTATGACAATCATGAGAGATTAAGACCACCATATGATTACCAAGAGAGATGGAATGTTCCTCCTTGTTCTGGTCCTCGGTATCATGACAGAGGTGTGCCTGCTCCTTATGGTTGTCATCCTAGTGAATCAGTTAGTTTTCCAGGTCATGGATGGAGATTTCCTCCCCCGTCAATGAATTACAGGGACTCCTTGCATTTTAGACCACACTTTGAAGATGCAATTCCAGTAGCAAACCGAGAAATGGGTGCTTCGGCATCGGTCACAGAAAAATCCATCCATGAATTCATGGTCAAGGATGCTAAGGGCAGAGACGTGAACCTCAGCACCTACAAAGGGAAGGTTCTTCTTGTAGTTAACGTCGCTTCAAAATGTGGATTTACAAATTCCAATTACACCCAGTTAACTGAGCTTTACAGCAAATATAAAGACAGAGGTCTTGAGATACTGGCATTTCCATGCAACCAGTTTCTGAAACAAGAGCCCGGGAGTAGCCAGGAGGCAGAGGAATTTGCCTGTACAAGGTACAAGGCTGAGTATCCCATTTTTGGAAAGGTACGTGTCAATGGACCTGATACAGCACCTGTCTACAAATTCCTTAAAGCAAATAAAACAGGATTTCTGGGTAGTAGGATAAAGTGGAATTTCACTAAGTTTTTGGTTGACAAGGAAGGGCATGTCCTCGCTCGTTATGGTCCAACCACCTCACCGTTGTCCATTGAAAATGACATCAAGACAGCATTGGGGGAGGCTTGA 4614 0.4304 MPPSRRKGGKKSAGGAAACRQFKLGDLVLAKVKGFPAWPATVSEPQKWGYSADRKKVFVCFFGAAPQIAFCNPADVEVFTEEKKQSLAKRPGRGGEFARAVKEIIECYEKLRTENQDGDTGSKEQMDESYSPDPSANTGAKEQMDAPFTINSQMKSSNCVIDRPEDAVALKDESYNIEASLEEATDNAIMTATVKSLFSTTQRNAPVQRSRSTLQVQNFVLPYSDGGNNGSNSNDNISADAIEDTSIRRRKHIRKSPDLLGCDDTDSPAFAPNVSMEDNGSEIITIISDAFTLNEGSTIDSNLKLEQSEPIECPEGEDDLNKGLDLEIKAVINKKKRKPNRKKETNDSGAQNASQSLQNMGGNSKERCPDQDGDEHLPLVKRARVRMGKSSAEAELNSIAQVQVKCGEEDITDSPHQIITSSNCENGSLAEGGTSVLNSALVSVSPSNLIALCSENGSQICKIKKDQMFGCSVDDEAALPPSKRIHRALEAMSANAAEEGEACMESSSIMTSSGRCCISTIKRCPCMTVNNQGGNDLELQRLDSCGIDSSHVSMYSFSTRSNTIISTENESSTEVDKHLAKFQCETGKDVIPGDRQQGGEDLSDSVVCHPAKIDSQIQSHGKISPDLDVKCCQVGNSKDSPCPSLLPNGDYNVRPSNHSDASDTLEHGGISLDPVAGDGESDKLVPQNSINVPQNVVVACEDMGKQAVGGSSKINDTHEVVKEVKFKGQEEDMNSVSISNDYSGEKGNLVILSSPSLTDGRVFLPLGSPPNTSVCNISTSDSSNILQNGSCSPDVHQKNTLSGPTDGWKDGIVENGRSRSVGKSTEAGDAALLYFEATLRTLKRTKESIGRATRIAIDCAKFGIATKVMEILVHDLEIESSLHRRVDLFFLVDSIAQCSRGLKGDIGGVYPSAMKAVLPRLLSAAAPLGNAAKENRRQCLKVLRLWLERKILPEPIIRHHMQELDSYSSSVSAGVHSHRSLRRDRPFDDPVRDMEGMLDEYGSNSSFQLPGFCMPRMLGDGGSDSDGGEFEAVTPEHDSETYEVQETTHAIEKRRHVLEDVDGELEMEDVAPSVDGELNSICNIDRGNAREFEKNLPVSFGPPLPQDLPPSSPPPPSSPPPPPPPPPPPPPSLPLPPPPPPTLHFKSATSDQYHVAVDSKGFEDSLTVKANVLHPMAEPLAAPRNSQPISDAVQYTVPECRDMPMQMPESTCSFNTFPVQPTDNSRNTDGATMHNKGYLIPPPHHVPSNQFSFVHGEHRMKPQREVPPPPSYSNGHHFMPSMTREYGYDNHERLRPPYDYQERWNVPPCSGPRYHDRGVPAPYGCHPSESVSFPGHGWRFPPPSMNYRDSLHFRPHFEDAIPVANREMGASASVTEKSIHEFMVKDAKGRDVNLSTYKGKVLLVVNVASKCGFTNSNYTQLTELYSKYKDRGLEILAFPCNQFLKQEPGSSQEAEEFACTRYKAEYPIFGKVRVNGPDTAPVYKFLKANKTGFLGSRIKWNFTKFLVDKEGHVLARYGPTTSPLSIENDIKTALGEA* 1538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1279 1537 MobiDBLite consensus disorder prediction 346 365 - -
Gso19g1279 1537 Gene3D Glutaredoxin 1370 1536 - -
Gso19g1279 1537 ProSitePatterns Glutathione peroxidases signature 2. 1436 1443 IPR029760 -
Gso19g1279 1537 MobiDBLite consensus disorder prediction 112 126 - -
Gso19g1279 1537 MobiDBLite consensus disorder prediction 112 141 - -
Gso19g1279 1537 MobiDBLite consensus disorder prediction 127 141 - -
Gso19g1279 1537 ProSiteProfiles Thioredoxin domain profile. 1373 1535 IPR013766 -
Gso19g1279 1537 Pfam Glutathione peroxidase 1379 1487 IPR000889 GO:0004602|GO:0006979
Gso19g1279 1537 Gene3D - 833 972 IPR008942 -
Gso19g1279 1537 ProSiteProfiles Glutathione peroxidase profile. 1369 1537 IPR000889 GO:0004602|GO:0006979
Gso19g1279 1537 Pfam PWWP domain 25 108 IPR000313 -
Gso19g1279 1537 MobiDBLite consensus disorder prediction 331 375 - -
Gso19g1279 1537 ProSitePatterns Glutathione peroxidases active site. 1399 1414 IPR029759 -
Gso19g1279 1537 PANTHER PWWP DOMAIN PROTEIN 1 1367 - -
Gso19g1279 1537 PRINTS Glutathione peroxidase family signature 1397 1414 IPR000889 GO:0004602|GO:0006979
Gso19g1279 1537 PRINTS Glutathione peroxidase family signature 1433 1449 IPR000889 GO:0004602|GO:0006979
Gso19g1279 1537 PRINTS Glutathione peroxidase family signature 1498 1507 IPR000889 GO:0004602|GO:0006979
Gso19g1279 1537 Gene3D - 14 119 - -
Gso19g1279 1537 Pfam CID domain 835 958 IPR006569 -
Gso19g1279 1537 MobiDBLite consensus disorder prediction 1022 1048 - -
Gso19g1279 1537 ProSiteProfiles PWWP domain profile. 24 82 IPR000313 -
Gso19g1279 1537 SUPERFAMILY Thioredoxin-like 1378 1535 IPR036249 -
Gso19g1279 1537 MobiDBLite consensus disorder prediction 1094 1146 - -
Gso19g1279 1537 CDD GSH_Peroxidase 1378 1530 IPR000889 GO:0004602|GO:0006979
Gso19g1279 1537 MobiDBLite consensus disorder prediction 1102 1144 - -
Gso19g1279 1537 MobiDBLite consensus disorder prediction 1030 1048 - -
Gso19g1279 1537 SMART 558neu5 834 965 IPR006569 -
Gso19g1279 1537 SMART PWWP_4 22 80 IPR000313 -
Gso19g1279 1537 ProSiteProfiles CID domain profile. 827 968 IPR006569 -
Gso19g1279 1537 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1367 - -
Gso19g1279 1537 SUPERFAMILY Tudor/PWWP/MBT 19 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1279 Gso-Chr19 41335891 41358214 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1279 - - gmx:112997599 2638.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1279 19 41335891 41358214 Gso3g1279 3 38496344 38513931 GST
Gso19g1279 19 41335891 41358214 Gso2g1235 2 15350727 15353985 PCT
Gso19g1279 19 41335891 41358214 Gso10g0216 10 2237520 2255298 PCT
Gso2g1235 2 15350727 15353985 Gso19g1279 19 41335891 41358214 PCT
Gso10g0216 10 2237520 2255298 Gso19g1279 19 41335891 41358214 PCT