Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1273 ATGGTGCAGAGTCTCTGTTTGATGGCTTCTCATGGTTACCCTCCTGGCCTTGTCTTGCACCCACAAGTACTGGGCTTGCCCTGCGCTACCATGAAGGGCTACCAAACATTCTTTCCTTCTCCAGTAGCAAAAGCAGACCTGATCAGATATCAGTCTCGTTGTCTTGAGCCAAGTCCATGTGAGGAGTCAATGAAATCTCAAAATGAATGGTTTGATTATAACAAGTTTGTCAATGTCGACTTCTCAGTTGAAAGGCCCATGCTTATTGATGACCAAGCAAACTGCTCAAATGCAGTTCTTCTTGGCTTTGGCATTGTTGACCAATGCACTAAGCGTGATGAAATTATAAATTTACTAATGTCTGAGACTGCCGAAGCAGGGATAGATGGAGCAAATTTATCTTTGTTATCAGACTTGATGAAATTGCAGTTGTCAGGCATTGATGAAACTCAGCAACCATTGTCATCTCTTATCTACCCAACTAGCAAATTCAACATCCTGAAGCCTTTGCTGTATTTTGTTCAAGGTTCAGCCCTTTCATCAAAGATCACGGTTCATCCAGATGGTCAAATGACATTTATGGGTACTGCAATTGAGTTGAAAGATCTTCTCTCTGTAGTTGCCGAGTCATACTTATCAAAATGCTCACGAAAGGGTGAAAAGCAATCTATGCTTGTTCCACACTTCAGTTGGGTGAATATCAATGAATTAGAGAGAAATCATTCCTCCACATTGAAGAATCAATCCACCTTAACTGCTCCTTTAAAGAGTCCTGAGAAAGTCAAACTCAAGCCATCACCAAGAAAGAACAAGAAAGTAGGCAGGGAAAGGGATCTCTACAAGAACTCTTCACATGCTTGTGAGACCCTTCTGTCCCTGATGGTTGACAAGAAGCAACGTCGTAAAACAGCAATTCTCTCACTGAAGAAATCCGGGCCTGAGCTTCCGGAGCTCCTGACACAATTTTCTGCTGGCATTGCCGGTACCGGCCTTGCAGTCCTGCTATCTGTGATGTGTAACCTAGCTTGTGGAAGGGCTACCTTTTGTGCTTATAGCTTGTTCAACACAGGGTTTGGATTTGGGTTGGTTTGGCTTTCTGGGGCTGTAAATAAGCTAAGGGCCACGATTGTCAACATCAGCAAGAATGCCGGAAAGTTGGGTTTGAAAGAAGAGGAAATGTTGCAGAAGCTGGATAGGAGCATAAGAGATATTTACTATACTGCTGCAGCCTTGCTAGCAGTGGTAGTGCTAAGGCTTGCTTGA 1263 0.4347 MVQSLCLMASHGYPPGLVLHPQVLGLPCATMKGYQTFFPSPVAKADLIRYQSRCLEPSPCEESMKSQNEWFDYNKFVNVDFSVERPMLIDDQANCSNAVLLGFGIVDQCTKRDEIINLLMSETAEAGIDGANLSLLSDLMKLQLSGIDETQQPLSSLIYPTSKFNILKPLLYFVQGSALSSKITVHPDGQMTFMGTAIELKDLLSVVAESYLSKCSRKGEKQSMLVPHFSWVNINELERNHSSTLKNQSTLTAPLKSPEKVKLKPSPRKNKKVGRERDLYKNSSHACETLLSLMVDKKQRRKTAILSLKKSGPELPELLTQFSAGIAGTGLAVLLSVMCNLACGRATFCAYSLFNTGFGFGLVWLSGAVNKLRATIVNISKNAGKLGLKEEEMLQKLDRSIRDIYYTAAALLAVVVLRLA* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1273 420 MobiDBLite consensus disorder prediction 243 277 - -
Gso19g1273 420 PANTHER OS05G0143300 PROTEIN 2 420 - -
Gso19g1273 420 PANTHER PROTEIN, PUTATIVE-RELATED 2 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1273 Gso-Chr19 41285024 41290119 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1273 - - gmx:100777424 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1273 19 41285024 41290119 Gso3g1273 3 38439381 38444228 GST
Gso19g1273 19 41285024 41290119 Gso2g1239 2 15397236 15402322 PCT
Gso19g1273 19 41285024 41290119 Gso10g0213 10 2214598 2219863 PCT
Gso2g1239 2 15397236 15402322 Gso19g1273 19 41285024 41290119 PCT
Gso10g0213 10 2214598 2219863 Gso19g1273 19 41285024 41290119 PCT