Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1269 ATGAGAGAGATACAGTTACCCTTAAGCCAAACACAGAAGGTTCGTCTTCAGAAGGCTCTGGAACAGTTAGAGTCTCTGTCAACGAAGGTGAATTCCGATGCTTCGGTAATCATCGCCGATTCCATCCACGTCAACCACGAAGATGGCGTCCTCAAGGGACACGGAACCGCCGACCTCAACGGCGAAGTCGTCGCCACCCTCTGCGGCGTCGTCGAGCGCGTCAACAAACTTGTCTACGTTCGCGCGTTACGCTCCAGGTATAAACCTGAGGTTGGTGACATTGTTATAGGGCGTGTTGTTGAGGTTGCTCAGAAGCGTTGGAGATTGGAGATAAATTACAATCAGGATGCAGTTTTGCTGCTCTCTTCTATGAACATGCCTGATGGTGTTCAGGCTGAAGTTCGTGGTTTCCAGCATGATGGCTTACACCTTCAAGCAAGGAGTCGGAAATATGGAAAGCTTAATAGAGGTCAACTGCTTACTGTCCCACCTTATTTAGTGAAGAGACAAAAACAACATTTCCATCATCTTGAGGAGTTTGGTATTGATTTGATACTTGGCTGTAATGGATTCATATGGGTTGGGGAACATGTTGAAGCCAAAGATGACATGATAGAAGATCAAGTGAGCCAATCTGATTCACAAGTTTTATTCCCTAATAAAAATTGTGTCAGTCTTGAAGAACAAGAGAAAAATTATACAATATTGGAGACAAGAAAATACATATCCAGAGCTGCTAATGCTGTTAGAGTATTGTCAACCTTAGGCTTCAATATTACATTGGAAATCATCAAGGGAATTATTGATCTAAGCCTATCTATGAATCTTGATATACACGATATGCTTGGTTCTGAGTTTTGTGTTCTGGTTGCCGAAAAAGAGGCTGAAAGGAGAAGCTCAATGAAAAAAAGGCGGTAG 918 0.4314 MREIQLPLSQTQKVRLQKALEQLESLSTKVNSDASVIIADSIHVNHEDGVLKGHGTADLNGEVVATLCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVVEVAQKRWRLEINYNQDAVLLLSSMNMPDGVQAEVRGFQHDGLHLQARSRKYGKLNRGQLLTVPPYLVKRQKQHFHHLEEFGIDLILGCNGFIWVGEHVEAKDDMIEDQVSQSDSQVLFPNKNCVSLEEQEKNYTILETRKYISRAANAVRVLSTLGFNITLEIIKGIIDLSLSMNLDIHDMLGSEFCVLVAEKEAERRSSMKKRR* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1269 305 Gene3D - 88 155 IPR012340 -
Gso19g1269 305 PANTHER PNAS-3 RELATED 10 131 IPR026699 GO:0000178|GO:0003723
Gso19g1269 305 PANTHER PNAS-3 RELATED 130 300 IPR026699 GO:0000178|GO:0003723
Gso19g1269 305 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 157 301 IPR036612 GO:0003723
Gso19g1269 305 SUPERFAMILY Nucleic acid-binding proteins 85 154 IPR012340 -
Gso19g1269 305 Gene3D - 36 87 - -
Gso19g1269 305 SUPERFAMILY Ribosomal L27 protein-like 44 82 - -
Gso19g1269 305 CDD S1_Rrp4 86 154 - -
Gso19g1269 305 Pfam KH domain 157 198 IPR004088 GO:0003723
Gso19g1269 305 PANTHER EXOSOME COMPLEX COMPONENT RRP4 130 300 - -
Gso19g1269 305 PANTHER EXOSOME COMPLEX COMPONENT RRP4 10 131 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1269 K03679 - gmx:100776358 586.645