Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1234 ATGGGATCATTGCACAAGGACCCAAATGTTTTCCACTTTAGCCATCCACATCCTTTGGACTGTACCACCCCACCCTCCACAGAAAACAATAATATTGTAAGCTGCTTTGGATGCAAGCTAAAAGTTAAGCATGGTGAAGACTATTACCAGTGCAAAACATGTGCTTTTTCTCTTCACCATGTGTGCTACAAGATGCCCTTGATCACAAACCACCCTTCACATCCAAGCCACGACCTAGTCCTTCTTGCTATACCTTTATCATCATCATCACCTTACACCAAAGCCACCCTCAACTGCGTGGCATGTGGGAACCATGTCACGGGCTTTTGCTACCACTGTGCCGAATGCAGCATTTTCTTTCACTCGTTGTGTCTCGCACTTCCCGTGTCCCTCGAAATCACCTTCCACCCCCACAAAATCAAGCTTGAGTTTTCACCACCGTATGATTTCTTCTGTGACTTGTGCAACAAACCCAGTTACAATAATGGGTGGCTATATAGGTGCAACATGTGTGAATTCGATACTCATATAGTTTGTGCCTTTGAAAACTTGGAGCCCCACTTGTTTCAAAACCCGTCTTTCCCTCAATCAAGCCCTTTGTTAAGGCAACTCACGAGTTACCAAGTGGAACACAAAAGGGTTAGTGCAAGTGTTGGTGATAGTTGCAAAGGGTATGAGTACGAGATCATGAGTTTGGTGGCACAACAAATTGGTGGGGGAATCAGAGAAAATTCTGATGGTGCAGTCGTTGGATGGGACAAGAGATTATATAGTAGTCCAAGGAAAAAGCATAACAAAACTGGGAGTGGGAAGATGAAGATTATTAGTGAACTTGAATTACAAGAAAAAGAACTAAGTCCTGCTGAACTTTTATTGAAGTTAGAAGAAAGAACACCACTTCGGGATAAATTGACTCCACTTTCTGATCATTCGGAAACACCGTTTAGTAACCAATATAGTGACTCATATTTTTCAATAGATTTGGCAAAGTCATATTCAACCCATCATGGACGTAGAAGTCAGGTACCAAGAGAAGTTGGTAGTGACCAGATAACTCGAGCTGTTACTATGCCAGAGAGAGTAATTGTAAGCAATTCTGGACAACGTGAAGAACCATTCGGTCTAGTTTATTGGCCATTCAACGATTCATACCATGTGGGGCAACAGAATAAGGTGAACAACGCAGCGTTTTACATCAAAGAAGGACCAACTACTGATTTTGGGAAATCAACTTCAAGCCAGAGAATCGTCAAGAAAAATCCTAACCAAAGCATTGCCAAAAGGTCTGTTGATCAAGATCAAACAATTGCCAAATCAGAGTCAGAAAGATACAGCTGTTCTTGTTGGAGGAAGTTCCTAACTTGCTGCCTTTAA 1374 0.4214 MGSLHKDPNVFHFSHPHPLDCTTPPSTENNNIVSCFGCKLKVKHGEDYYQCKTCAFSLHHVCYKMPLITNHPSHPSHDLVLLAIPLSSSSPYTKATLNCVACGNHVTGFCYHCAECSIFFHSLCLALPVSLEITFHPHKIKLEFSPPYDFFCDLCNKPSYNNGWLYRCNMCEFDTHIVCAFENLEPHLFQNPSFPQSSPLLRQLTSYQVEHKRVSASVGDSCKGYEYEIMSLVAQQIGGGIRENSDGAVVGWDKRLYSSPRKKHNKTGSGKMKIISELELQEKELSPAELLLKLEERTPLRDKLTPLSDHSETPFSNQYSDSYFSIDLAKSYSTHHGRRSQVPREVGSDQITRAVTMPERVIVSNSGQREEPFGLVYWPFNDSYHVGQQNKVNNAAFYIKEGPTTDFGKSTSSQRIVKKNPNQSIAKRSVDQDQTIAKSESERYSCSCWRKFLTCCL* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1234 457 SUPERFAMILY Cysteine-rich domain 44 138 IPR046349 -
Gso19g1234 457 Pfam C1 domain 135 180 IPR004146 -
Gso19g1234 457 Pfam C1 domain 72 124 IPR004146 -
Gso19g1234 457 Pfam C1 domain 13 62 IPR004146 -
Gso19g1234 457 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN PROTEIN 10 341 - -
Gso19g1234 457 PANTHER - 10 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1234 Gso-Chr19 40823283 40826156 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1234 - - gmx:102661734 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1234 19 40823283 40826156 Gso3g1231 3 37952479 37953618 GST