Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1230 ATGAACAGCGCCATCTTCAAAGCTTCAAACAGCAACAATCTCCATTCCTCTCTCAGGGCCGCACTCTTCCATTCCACCTCTCCCTTGCAACGTAAACGCCGCAATCATTGGGACTCCAGAGGGAGCAACCATACCTCGAGAAGGTTTAGAAGGGTGCAAGCGAAACACAGAGTAATGAACAGTATCAATGATTATGCAGAATCCCTGTTTCAGAGCTGGAAGCAAGGTATTGATAGGGATGACCCATCATCAAGTCGAGGCACCTCATGGTTTAAAAAACAATATTCTGATGGGGCCTCTGGAAGGTACCGGAATAGCAATAAAGGATCAAGTCATCGGTACAGAAGAGATCCTTCTTTTTGTGAAGATGATTTTGATGTTGAAACCATTCTCCGTTCTGCCTTTGGTGGGAATAGATTCTTCTATTGGTCCTTCATCAATGAGGAAAATCCTCAGTGGAGGAGGTCTGAACGCTTTTCTAATTTTGAGAAATCATGGAGCTGGAGATATCGAAACGAAAATGATTATGACTCTTCATCTGAGTCTGATAGTTTAGATTCAGATTTAGTTTCTGATAGATTAGCCCTTGGATTGAGTGCTTCAGGTTCCCTGAAACTTGAAGATGTAAAAAATGCGTACCGGGTCTGTGCTCTAAAATGGCATCCAGATCGTCATCAAGGCTCTTCGAAGGCTATAGCAGAAGAGAAGTTCAAGCTTTGCAGTGCAGCTTATCAATCTTTATGTGATAAGCTGGCCTTGGATTAA 765 0.4301 MNSAIFKASNSNNLHSSLRAALFHSTSPLQRKRRNHWDSRGSNHTSRRFRRVQAKHRVMNSINDYAESLFQSWKQGIDRDDPSSSRGTSWFKKQYSDGASGRYRNSNKGSSHRYRRDPSFCEDDFDVETILRSAFGGNRFFYWSFINEENPQWRRSERFSNFEKSWSWRYRNENDYDSSSESDSLDSDLVSDRLALGLSASGSLKLEDVKNAYRVCALKWHPDRHQGSSKAIAEEKFKLCSAAYQSLCDKLALD* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1230 254 Gene3D DnaJ domain 193 249 IPR036869 -
Gso19g1230 254 SMART dnaj_3 190 252 IPR001623 -
Gso19g1230 254 MobiDBLite consensus disorder prediction 82 107 - -
Gso19g1230 254 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 3 253 - -
Gso19g1230 254 MobiDBLite consensus disorder prediction 25 48 - -
Gso19g1230 254 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 3 253 - -
Gso19g1230 254 MobiDBLite consensus disorder prediction 31 45 - -
Gso19g1230 254 CDD DnaJ 196 249 IPR001623 -
Gso19g1230 254 Pfam DnaJ domain 197 250 IPR001623 -
Gso19g1230 254 SUPERFAMILY Chaperone J-domain 147 249 IPR036869 -
Gso19g1230 254 PRINTS DnaJ domain signature 195 213 IPR001623 -
Gso19g1230 254 PRINTS DnaJ domain signature 213 228 IPR001623 -
Gso19g1230 254 PRINTS DnaJ domain signature 232 252 IPR001623 -
Gso19g1230 254 ProSiteProfiles dnaJ domain profile. 191 252 IPR001623 -
Gso19g1230 254 MobiDBLite consensus disorder prediction 77 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1230 Gso-Chr19 40795005 40799220 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1230 - - gmx:100807880 493.426