Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1209 ATGACGGAACCAACAGAGCCATCCACGTCATCTTCATTGGCGAGGGACCCAACCACCGTGGTTCACCCAAGGCGCGAGCCCTTCGAGCACGGCCTCTTGCCAATCCCGCGCCTCATCTTCTCCGACCCGGCGCAAACCCTAATTCCGTTGAAGCAGAAGCTTCTCGAGTTATCCTCCAACCAGCGAGTCGACTTGGCGGCAATCTCCGAGTCACTGCAGATCTCCATTGAGCACGCCAGGCTCGTCCTCGATACCCTCGCCTCGATTCTGCACTCCGACTCCGAACCTCTCGTCGTCGCCAATCTCGTCGAAATCGATTCCGTCGGCGTCGACGTCCATGATTTGGTTTTGTTCCTCTACATTCAATCCTACAAGAGGCTCCTCCCGCGCACGCATAAGGACTCCGCCGCCGTCACCGACGTCTGGCCTTCCACCTCCGCCTTCGATGGCTACTTGTCCGCTCTCTCGCCGCTTCAGCTCGTACGCAGCAACAGTCGGCGGTTTATGCCGTCCCAGGCTGATGAAGAGGCGCATCAGTTGTCGTATCTGCAAAAGCACTTGGCTAACATTGTGTCTCTTCTAGCAGAGCCTGTGGAGGGAGAAGGCGATGAGTCCCTGGTTTTAACCATGGATAGATTTGAGCATCTTGGGTTCCTAATTCAGTTTGGTGATAAGGGATCAGAAGGAAATTCGTTTAGTCAATGTTCTCCTTTTTTTGCAAACTCAGACCCTGACATGCCTGCTGTTCCTGTTCCTGCCGCACAAGTTCATGATTGGCTTCTGCAAAATGTAGCGGCTGCTTTGGAATATATTTCTGAACGGACTTCTTCAAAGGAAAATGGCCCAGCTAGTGCCTCTGATCAGGATGTTGCCATGACTGATGCAAGCACTGTCTCAGTTAAGGTCTCAACAGGTACTAGAGGGGCAAGTTTCATTGAAGGGATCTCTAAATCGTCATATGCGAAGCATGCATCTGACATTAAAGGTTCCTCTGTTAAGGTTCTAAATTGCCACGAATCTGCCATCTACATCTTAGCACCATTGAGATATGCCACTGTCTATGGATGCTCAGATGCAACAATAGTTCTAGGAGCAGTTGGCAAGGCTGTGAGAGTAGAACACTGTGAACGAGTTCATGTAATTGTAGCAGCAAAACGTATTTGTATTGCTAATTGCCGTGAATGTGTTTTCTTTTTGGGGGTGAATCAGCAACCACTTATTGTTGGTGATAACCATAAGCTGCAGGTGGCTCCCTATAATACATTTTATGCCCAATTGGAGGAGCATATGAGTGAAGTTGGAATTGTGCCCACAGTGAACCGATGGAATGAACCTCTAGCATTAGGCATGGTTGATCCCCATGATTCATTATCTCATCCAGCTGGTGTCTCTGATGTTCAAGCTGAGTCTGCTACACTGGTGGACCCTGATCAGTTCACTAATTTTGTGATTCCAAGCTGGCTTGTAGAAGAGTCCACTGGGTCTACAAAAGACAATCCATTCACGTTACCAGATGCGTATATGGCATCTCAGCATAAAAATCACAAAAATTTAGAGGAGATAAGGCAACTCTTACGAGAAGCATCTTTAGAAGAAAGTCGCAAACGAGAATTGTCATCTGCGCTCCATGTCTACTTCAAGGACTGGTTATATGCTTCGGGAAACATTCGTCAGCTTTACTGTCTACAAGGTGATTGA 1698 0.4835 MTEPTEPSTSSSLARDPTTVVHPRREPFEHGLLPIPRLIFSDPAQTLIPLKQKLLELSSNQRVDLAAISESLQISIEHARLVLDTLASILHSDSEPLVVANLVEIDSVGVDVHDLVLFLYIQSYKRLLPRTHKDSAAVTDVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQADEEAHQLSYLQKHLANIVSLLAEPVEGEGDESLVLTMDRFEHLGFLIQFGDKGSEGNSFSQCSPFFANSDPDMPAVPVPAAQVHDWLLQNVAAALEYISERTSSKENGPASASDQDVAMTDASTVSVKVSTGTRGASFIEGISKSSYAKHASDIKGSSVKVLNCHESAIYILAPLRYATVYGCSDATIVLGAVGKAVRVEHCERVHVIVAAKRICIANCRECVFFLGVNQQPLIVGDNHKLQVAPYNTFYAQLEEHMSEVGIVPTVNRWNEPLALGMVDPHDSLSHPAGVSDVQAESATLVDPDQFTNFVIPSWLVEESTGSTKDNPFTLPDAYMASQHKNHKNLEEIRQLLREASLEESRKRELSSALHVYFKDWLYASGNIRQLYCLQGD* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1209 565 SMART carp 337 374 IPR006599 -
Gso19g1209 565 SMART carp 375 409 IPR006599 -
Gso19g1209 565 MobiDBLite consensus disorder prediction 1 20 - -
Gso19g1209 565 PANTHER BNAC04G02540D PROTEIN 14 565 - -
Gso19g1209 565 ProSiteProfiles C-CAP/cofactor C-like domain profile. 282 435 IPR017901 -
Gso19g1209 565 MobiDBLite consensus disorder prediction 1 17 - -
Gso19g1209 565 Pfam Tubulin binding cofactor C 329 444 IPR012945 -
Gso19g1209 565 PANTHER UNCHARACTERIZED 14 565 IPR039589 -
Gso19g1209 565 Coils Coil 521 541 - -
Gso19g1209 565 Gene3D - 309 468 IPR016098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1209 Gso-Chr19 40575773 40584532 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1209 K16810 - gmx:100801317 1078.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1209 19 40575773 40584532 Gso3g1208 3 37731252 37740747 GST