Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1205 ATGGTAACCATGTATGGAATATGGTGCTTCATCACGGTCCTGTTGTTCTCCCCAGTGGCGTTTTCGGAACTGTGCAACCCACAGGACAAGAAAGTGCTGCTCCAAATCAAGAAGGACTTCAACAACCCTTACCTGCTAGCCTCCTGGAACCCTAACACCGATTGCTGCAACTGGTACTGCGTCCAGTGCCACCCCGAAACGCACCGCATCAACTCCCTCGTCATATTATCCTCTGTTCCCCAAACCAATTTATCCGGCCCAATACCACCCTCCGTCGGTGACCTACCTTTTCTTGAGACCCTTCAATTCCACAAGCTCCCTAAACTCACCGGCCCAATTCAGCCCACTATAGCCAAGCTCACTAAACTCAAGGAGATCTACATCAGCTGGACCAATGTCTCCGGCCCAGTACCCGATTTCTTGGCCCGGCTCACTAACCTCCAGTTTCTTGACCTTTCCTTTAATAACCTCTCAGGCCCAATCCCCAGCTCACTTTCCCAGCTGTCCAACCTAGTTTCCTTACGCTTGGACCGGAATAGGCTCACGGGCCCAATCCCGGAATCATTCGGGTCCTTCAAGAAGCCTGGCCCGAGCCTGTGGCTATCCCACAACCAGCTTTCCGGGCCCATTCCGGCTTCCTTGGCCAACATAGACCCACAAAGGATAGACTTCTCCAGGAACAAACTCGAAGGCGACGCCTCCGTGCTTTTCGGTCGCAACAAAACGACACAGATAGTTGACGTTTCGAGGAACTCGTTGGCGTTTGATTTATCCAAGGTGGAGTTCCCCACGAGCTTGATATCGTTGGATCTGAATCACAATCAGATCACCGGGAGCATTCCCGTGGGGTTGACCGCAGTGGATTTTTTGCAGGGGTTCAACGTGAGCTATAATCGGTTGTGTGGTGAGATACCGCAGGGTGGGAGATTGCAAAAGTTTGATGTGTATTCGTATTTTCACAACAAGTGTTTATGTGGATCACCCCTTACTAGCTGCAAGTGA 1002 0.513 MVTMYGIWCFITVLLFSPVAFSELCNPQDKKVLLQIKKDFNNPYLLASWNPNTDCCNWYCVQCHPETHRINSLVILSSVPQTNLSGPIPPSVGDLPFLETLQFHKLPKLTGPIQPTIAKLTKLKEIYISWTNVSGPVPDFLARLTNLQFLDLSFNNLSGPIPSSLSQLSNLVSLRLDRNRLTGPIPESFGSFKKPGPSLWLSHNQLSGPIPASLANIDPQRIDFSRNKLEGDASVLFGRNKTTQIVDVSRNSLAFDLSKVEFPTSLISLDLNHNQITGSIPVGLTAVDFLQGFNVSYNRLCGEIPQGGRLQKFDVYSYFHNKCLCGSPLTSCK* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1205 333 Pfam Leucine rich repeat 122 181 IPR001611 GO:0005515
Gso19g1205 333 PANTHER POLYGALACTURONASE INHIBITOR 2 7 332 - -
Gso19g1205 333 Pfam Leucine Rich repeat 264 278 IPR001611 GO:0005515
Gso19g1205 333 PANTHER POLYGALACTURONASE INHIBITOR 1 7 332 - -
Gso19g1205 333 Gene3D Ribonuclease Inhibitor 23 333 IPR032675 -
Gso19g1205 333 SUPERFAMILY L domain-like 24 332 - -
Gso19g1205 333 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1205 Gso-Chr19 40526407 40527638 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1205 70 327 Receptor kinase-like Gene Family AT5G01890 26.736 4.40e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1205 - - gmx:100799184 683.715