Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1177 ATGAACAACAACCCAACAACAATCATCGGTTCCACTACCCACGGATCAGAAGAAGAAGATGAACACATCACTGAAATAAGGGAAATCCACGCGTTAACCCCGCCGCCGCCACGTGGCAGAGCCTGGGAGACAGTGCATACCCACAGGTCAAGCTCTCTCTCCGTAGCTTCTGAAGGCGGCGCCTCTTCCAGCGAGAACTTCAGCATGAGCAGAGAGTTCAGCGCTCTGGTTCTCGCAGGGTCCAGCATCGACCACGACAACAGCAACAACAACAACAGCAACAGTCCCATGAACGAAAACAACAATAGTAACAGCTTGTTGGGGAGGATCAGAGAAGAGGACTTGATGGAAGAGACGAACCCTTTGGCGATCGTGCCGGATAACCACCCTCTGGACCCGGTTCCGTCGTCGTCGTCTCAGGGAGTAAGGGGTGGCGGCGCTGCACGTGAGGAGCACGTGTCGGTTCAGCGGGTGAAGAAGGAGGAGGTTGATGCCAAGATATCGGCGTGGCAGAACGCTAAGGTTGCGAAGATTAACAACAGATTCAAGAGAGAAGACGCTGTGATCAATGGGTGGGAGAGCGAGCAGGTTCAGAAAGCTTCCTCCTGGATGAAGAAAGTTGAGAGGAAGCTGGAGGAGAAAAGGGCAAGAGCAATGGAGAAAATGCAAAACGACATAGCAAAAGCTCATAGAAAAGCAGAGGAGAGAAGGGCATCGGCAGAGGCAAAAAGGGGAACCAAAGTGGCAAGGGTTTTGGAGATTGCTAGTCTCATGAGAGCAGTTGGAAGACCTCCTGCCAAAAAATCCTTCTTCTAA 816 0.5196 MNNNPTTIIGSTTHGSEEEDEHITEIREIHALTPPPPRGRAWETVHTHRSSSLSVASEGGASSSENFSMSREFSALVLAGSSIDHDNSNNNNSNSPMNENNNSNSLLGRIREEDLMEETNPLAIVPDNHPLDPVPSSSSQGVRGGGAAREEHVSVQRVKKEEVDAKISAWQNAKVAKINNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPAKKSFF* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1177 271 MobiDBLite consensus disorder prediction 46 67 - -
Gso19g1177 271 MobiDBLite consensus disorder prediction 1 67 - -
Gso19g1177 271 Pfam Remorin, C-terminal region 162 266 IPR005516 -
Gso19g1177 271 MobiDBLite consensus disorder prediction 82 104 - -
Gso19g1177 271 Coils Coil 204 239 - -
Gso19g1177 271 PANTHER OS02G0116800 PROTEIN 18 270 - -
Gso19g1177 271 MobiDBLite consensus disorder prediction 118 159 - -
Gso19g1177 271 PANTHER - 18 270 - -
Gso19g1177 271 MobiDBLite consensus disorder prediction 220 242 - -
Gso19g1177 271 MobiDBLite consensus disorder prediction 14 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1177 Gso-Chr19 40161068 40163999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1177 - - gmx:100527684 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1177 19 40161068 40163999 Gso2g1552 2 33161306 33164022 PCT
Gso2g1552 2 33161306 33164022 Gso19g1177 19 40161068 40163999 PCT