Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1165 ATGGCTGATTTTTTCGTCTTTGATATTGCTGAAACATTGCTAGAGAAGCTTGCTTCTTATGTTTCTGAAGAAGCTTCTCGAGCCTATGATGTGTACGAGGATCTTCAAGGGATCAAAGACACCTTGTCAATTGTGAAAGGCGTGCTGTTGGATGCAGAAGAGAAGAAGGAGCAGAAGCACGGGTTGCGCGAATGGCTCAGGCAGATTCAAAATGTCTGCTTTGATGCTGAAGACGTATTGGATGGATTTGAGTGCCATAACTTGAGAAAGCAAGTTGTCAAAGCATCAGGCAGCACCGGGATGAAGGTAGGCCACTTCTTTTCTTCGTCCAATTCTCTTGTTTTCCGTCTTAGGATGGCTCGTCAAATCAAACATGTTAGGTGTAGATTGGATAAGATAGCAGCTGATGGGAACAAGTTTGGTCTAGAGAGGATTTCTGTTGACCACAGACTTGTGCAAAGGAGAGAAATGACTTATTCACATATTGATGCTTCAGGAGTGATGGGAAGGGACAATGATAGGGAAGAAATTATCAAGCTTTTGATGCAACCTCACCCTCATGGGGATGGTGATGGAGATAAAAGTGTGTGTGTTATTCCCATAGTGGGTATTGGAGGCTTGGGGAAGACTACACTTGCAAGGTTGGTGTTCAATGATAAGAGGATGGATGAACTTTTCCAATTAAAGATGTGGGTGTGTGTCTCTGATGACTTTGACATTAGGCAGATAATTATTAAAATCATCAACTGTGCTTCAGCTTCTACCTCAGCTCCATCAATTGCTCTTGCTCACCATGAAAGCATTAACAACTTAGATATTGAGCAGCTACAAAGTCAGCTTAGACACAAGCTTTCTGGTCTGACGTATTTACTGGTCTTGGATGACATATGGAATGATGATCGTGCAAAATGGATAGAATTAAATGATTTAATAAAAGTTGGTGCAGTGGGAAGCAAAATTTTAGTGACAACACGGAGTGACTCAATTGCTTCAATGGTGGGCACTGTACCCTCTTATGTTTTAGAAGGTCTGTCTGTGGAGAATTGTTTGTCTCTGTTTGTTAAATGGGCATTCAAGGAAGGTGAAGAAAAAAAATACCCAAATCTAGTGGATATAGGAAAAGAAATGGTGAAAAAATGCCAAGGGGTTCCACTAGCTGTTCGAACTTTAGGAAGTTCTCTGTTCTTGAATTTTGATTTAGAAAGATGGGAATTTGTAAGAGACCATGAGATCTGGAACTTAAACCAAAAGAAAGATGACATTTTACCTGCCCTTAAGTTGAGCTATGATCAAATGCCATCTTATTTGAGGCAGTGTTTTGCTTATTTTTCCCTCTTTCCCAAGGATTTTGGCCACATTGGTTCTCATTTTGTGAGTCTTTGGGGATCATTTGGATTACTTCGATCTCCCTCTGGAAGTCAAAAGGTGGAGAATATTGCAAGACAATATATAGCCGAGTTACATTCAAGATCATTTCTCGAGGATTTTGTGGACTTTGGCCATGTTTACTATTTCAAAGTACATGATTTGGTACATGATCTTGCGTCATATGTTGCCAAAGAGGAGTTTCTAGTGGTAGACTCCCGTACTCGCAATATACCCAAGCAAGTAAGGCATTTATCGGTTGTTGAAAATGATTCACTAAGCCATGCTTTATTCCCCAAGTCCAGAAGTGTAAGAACTATATATTTTCCCATGTTCGGAGTGGGTCTTGACAGTGAAGCTCTTATGGATACATGGATAGCAAGATACAAATACTTAAGGGTTTTACATTTAAGTGATTCCTCTTTTGAGACTCTACCCAATTCAATTGCTAAATTGGAGCACTTGCGAGCTCTCAATCTTGCAAATAACTGCAAAATAAAAAGACTTCCTCATTCGATATGCAAACTCCAAAATTTGCAAGTTTTGTCACTGAGAGGATGCATGGAGCTTCAAACATTGCCTAAAGGATTAGGGATGTTAATGAGCCTTCGAAAATTTTATATAACCACAAAACAATCTATTCTGTCAGAGGATGAATTTGCAAGATTGAGAAATCTTCATACTCTGAGTTTTGAATATTGTGACAATTTGAAATTTTTGTTCAAAGTGGCACAAGTCAGTTCTCTTGAAGTTTTGATCGTTCAATCATGTGGGAGCCTAGAGTCGTTACCTCTTCATATTCTCCCTAAGCTGGAGTCTCTGTTTGTAAAACGGTGCGAGAGGCTAAATTTGTCGTTCAACAGTGAAAGTCCTATCCAAAAATTGAGGATGAAATTGCTGCATCTTGAGCATTTTCCAAGGCAACAGATATTGCCTCAATGGATTGAAGGAGCCACAAACACTTTACAGACATTGTTTATTGTAAATTTTCATAGTCTTGAGATGCTTCCTGAGTGGCTGACAACAATGACTCATGTTAAGATGCTCCATATTGTTAACTGTCCTCGGCTGTTGTATTTCCCAAGTGACATGAATCGCCTCAGTGCCCTAGAAGATTTGGACATAGATGGTTGTCCTGAATTGTGTCGAAAATGTCAGCCACTATCTGGTGAGTACTGGTCCTCCATTGCTCACATAAAACGCGTTTCTTTTGGTGAAAAAAAAGAAGGGAAACTGCTTTTTCAAACTCAAACATGGATCCGGTTGGGGTTGCGCGATTAG 2646 0.3987 MADFFVFDIAETLLEKLASYVSEEASRAYDVYEDLQGIKDTLSIVKGVLLDAEEKKEQKHGLREWLRQIQNVCFDAEDVLDGFECHNLRKQVVKASGSTGMKVGHFFSSSNSLVFRLRMARQIKHVRCRLDKIAADGNKFGLERISVDHRLVQRREMTYSHIDASGVMGRDNDREEIIKLLMQPHPHGDGDGDKSVCVIPIVGIGGLGKTTLARLVFNDKRMDELFQLKMWVCVSDDFDIRQIIIKIINCASASTSAPSIALAHHESINNLDIEQLQSQLRHKLSGLTYLLVLDDIWNDDRAKWIELNDLIKVGAVGSKILVTTRSDSIASMVGTVPSYVLEGLSVENCLSLFVKWAFKEGEEKKYPNLVDIGKEMVKKCQGVPLAVRTLGSSLFLNFDLERWEFVRDHEIWNLNQKKDDILPALKLSYDQMPSYLRQCFAYFSLFPKDFGHIGSHFVSLWGSFGLLRSPSGSQKVENIARQYIAELHSRSFLEDFVDFGHVYYFKVHDLVHDLASYVAKEEFLVVDSRTRNIPKQVRHLSVVENDSLSHALFPKSRSVRTIYFPMFGVGLDSEALMDTWIARYKYLRVLHLSDSSFETLPNSIAKLEHLRALNLANNCKIKRLPHSICKLQNLQVLSLRGCMELQTLPKGLGMLMSLRKFYITTKQSILSEDEFARLRNLHTLSFEYCDNLKFLFKVAQVSSLEVLIVQSCGSLESLPLHILPKLESLFVKRCERLNLSFNSESPIQKLRMKLLHLEHFPRQQILPQWIEGATNTLQTLFIVNFHSLEMLPEWLTTMTHVKMLHIVNCPRLLYFPSDMNRLSALEDLDIDGCPELCRKCQPLSGEYWSSIAHIKRVSFGEKKEGKLLFQTQTWIRLGLRD* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1165 881 PANTHER DISEASE RESISTANCE PROTEIN RP 6 790 IPR044974 GO:0006952
Gso19g1165 881 Gene3D Ribonuclease Inhibitor 550 859 IPR032675 -
Gso19g1165 881 Gene3D - 343 427 IPR042197 -
Gso19g1165 881 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 790 - -
Gso19g1165 881 Pfam NB-ARC domain 193 430 IPR002182 GO:0043531
Gso19g1165 881 Gene3D - 10 124 - -
Gso19g1165 881 Pfam Rx N-terminal domain 11 98 IPR041118 -
Gso19g1165 881 Gene3D - 150 337 IPR027417 -
Gso19g1165 881 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 442 IPR027417 -
Gso19g1165 881 CDD RX-CC_like 13 134 IPR038005 -
Gso19g1165 881 Pfam Leucine rich repeat 586 642 IPR001611 GO:0005515
Gso19g1165 881 SUPERFAMILY L domain-like 506 851 - -
Gso19g1165 881 PRINTS Disease resistance protein signature 198 213 - -
Gso19g1165 881 PRINTS Disease resistance protein signature 283 297 - -
Gso19g1165 881 PRINTS Disease resistance protein signature 380 394 - -
Gso19g1165 881 PRINTS Disease resistance protein signature 629 645 - -
Gso19g1165 881 Gene3D - 428 517 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1165 Gso-Chr19 39962033 39966513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1165 575 664 Receptor kinase-like Gene Family AT3G11080 34.066 6.18e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1165 - - gmx:100794422 1751.87