Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1153 ATGGATTCTCTGCTTGGTAATTGGCCATCCTTTGATCCTCACAACTTCAGTCAGCTTCGACCTTCCGATCCTTCTAGTTCTTCTAGAATGACGCTACCCACTTACCATCCTACGCACAGCAGGACCCTTCCAGCACCTGATCAAGTGATAAGTACAGAAGCCAAAAATATCCTCGTGAGACACATTTATCAACATGCTGAGGAGAAGTTGAAACCAAAAAGAGCTGCATCTGATAACCTTTTGCCTGATCATGGATGCAAGCAACCTAGGGTTTCTAGTTGA 282 0.4468 MDSLLGNWPSFDPHNFSQLRPSDPSSSSRMTLPTYHPTHSRTLPAPDQVISTEAKNILVRHIYQHAEEKLKPKRAASDNLLPDHGCKQPRVSS* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1153 93 MobiDBLite consensus disorder prediction 69 93 - -
Gso19g1153 93 PANTHER DET1- AND DDB1-ASSOCIATED PROTEIN 1 1 92 IPR033575 GO:0032434
Gso19g1153 93 PANTHER DET1- AND DDB1-ASSOCIATED PROTEIN 1 1 92 - -
Gso19g1153 93 Pfam Det1 complexing ubiquitin ligase 3 68 IPR018276 -
Gso19g1153 93 MobiDBLite consensus disorder prediction 1 47 - -
Gso19g1153 93 MobiDBLite consensus disorder prediction 10 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1153 Gso-Chr19 39762968 39765863 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1153 K11792 - gmx:100784555 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1153 19 39762968 39765863 Gso3g1153 3 36917072 36920696 GST