Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1130 ATGTCTCAATCCCATTCAACTGGAAAATGTTCTTCCATGACTTCAATACTCCTCTTGTTTATGCTTCTAATCACTAACACAGGCACAACAGGTGCACAATCTGGTGTATGCTATGGAAGAGTTGGCAACAATTTACCGTCCCCACAAGAAGTAGTGGCCCTTTACAAACAATATGATTTCCGAAGGATGAGAATCTATGATCCAAGCCAACAAGTACTCCAAGCTCTGAGAGGTTCCAACATTGAGTTGCTGCTAGATCTCCCTAACGTCAACCTCCAAAGTGTAGCTTCTAGCCAAGACAACGCAAACAGATGGGTGCAAGACAACGTCAGAAACTATGCCAACAATGTCAGATTCAGGTACATTTCGGTGGGAAATGAAGTAAAACCTTGGGACTCATTTGCACGTTTTGTAGTGCCTGCAATCCAAAACATCCAAAGAGCCGTTTCTGCGGCTGGCCTTGGAAACCAAATAAAAGTTTCCACTGCCATTGAAACTGGTGCCTTGGCAGAATCATACCCTCCATCAAGGGGCTCTTTTAGGTCTGACTATTTAACATCATATCTTGATGGTGTCATTAGACATCTAGTGAACAATAATGCCCCATTATTGGTTAATGTGTACCCTTATTTCGCTTACATTGGAAACCCTAGGGACATTAGTCTTGACTATGCACTTTTTAGGTCTCCTTCAGTGGTAGTGCAAGATGGTTCACTTGGTTACCGTAACCTTTTTAATGCTATGGTGGATGCTGTTTATGCTGCATTGGAGAAAGCAGGAGGAGGGTCACTGAACATAGTTGTGTCTGAGAGTGGATGGCCTTCTTCTGGTGGAACAGCCACTTCACTTGATAATGCAAGAACTTACAACACAAACTTGGTTCGGAATGTGAAACAAGGGACCCCAAAGAGGCCTAATAGACCCCTTGAAACTTATGTGTTTGCCATGTTTGATGAAAATCAGAAGCAACCAGAGTATGAGAAGTTTTGGGGGCTCTTCCTTCCAAATAAACAGCCTAAATACTCAATTAATTTGAATTAG 1041 0.4246 MSQSHSTGKCSSMTSILLLFMLLITNTGTTGAQSGVCYGRVGNNLPSPQEVVALYKQYDFRRMRIYDPSQQVLQALRGSNIELLLDLPNVNLQSVASSQDNANRWVQDNVRNYANNVRFRYISVGNEVKPWDSFARFVVPAIQNIQRAVSAAGLGNQIKVSTAIETGALAESYPPSRGSFRSDYLTSYLDGVIRHLVNNNAPLLVNVYPYFAYIGNPRDISLDYALFRSPSVVVQDGSLGYRNLFNAMVDAVYAALEKAGGGSLNIVVSESGWPSSGGTATSLDNARTYNTNLVRNVKQGTPKRPNRPLETYVFAMFDENQKQPEYEKFWGLFLPNKQPKYSINLN* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1130 346 Gene3D Glycosidases 34 346 - -
Gso19g1130 346 SUPERFAMILY (Trans)glycosidases 35 344 IPR017853 -
Gso19g1130 346 Pfam Glycosyl hydrolases family 17 35 344 IPR000490 GO:0004553|GO:0005975
Gso19g1130 346 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 24 343 IPR044965 GO:0004553|GO:0005975
Gso19g1130 346 ProSitePatterns Glycosyl hydrolases family 17 signature. 264 277 IPR000490 GO:0004553|GO:0005975
Gso19g1130 346 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG3-RELATED 24 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1130 Gso-Chr19 39468685 39471719 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1130 23 345 Glycoside Hydrolase AT3G57270 62.462 2.49e-146 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1130 - - gmx:100776890 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1130 19 39468685 39471719 Gso3g1136 3 36701308 36704089 GST