Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1119 ATGGGGTCAGAAACCGAATTGAAGCTTCCAATTATTGACTTCTCCATTGAGTACTTGGAGTCCAATTCTGATCAGTGGGAATCAGTGAAATCCCAAGTTCACAAGGCCCTTGTAGAGTATGGTTGCTTTGAGGCTGTGTTTGATAAAGTCCCTTTGGACCTTCGAAAAGCCATTTTTCTTGAAGTGGAAGAGCTGTTTGATCTCCCTTTACAAACCAAACAACGAGTTGTGTCTAGTAAACCATACCATGGTTATGTTGGGCCTCTTCAACTCTATGAGAGCATGGGAATTGATGATGTAGATGTTCATGACAAAGTGGAAAGTTTAATCAAGATCTTATGGCCACAAGGAAAACCAGGTTTTAGCAAAAATCTACAATCCTTCACAGAGCAAGTGACAAGGTTGGATCAGATTATTAGGAAGATGATTTTAGAGAGTTTAGGAATTGAAAAATATATGGACGAGCACATGAACTCAACAAATTACCTTGCACGGCTTATCAAGTACCAAGGCCCTCAAACTAATGAAGCAAAAGTTGGCATAGGAGAGCACACGGATAAGAACATATTGACCACATTGTGTCAAAATCAAATTGATGGTTTAGAGGTACAGACCAAAAGTGGAGAGTGGATCAAATGCAAGCCCTCAACACCAAGTAGTTTCGTTGTTGTCACCGGGGACACACTTTATGCATGGACAAATGGGAGGGTGCATACGCCGGCTCATCGAGTGATGATGAGTGGAAATGAGACAAGGTTCTCTATTGGATTGTTTACAGTTCCAAAACCAGGGTTCATAATAAAGGCTCCAGATGAGCTTGTGACAGAGGAGCACCCTTTGCTTTTCAAGCCCTTTGTCCAGAGTGAGTTCATGAAGTTTCTTCGCTCTTCTGAGAGTACCAAAAATGCCCTGAAGGTTTATTGTGGAGTCTGA 933 0.418 MGSETELKLPIIDFSIEYLESNSDQWESVKSQVHKALVEYGCFEAVFDKVPLDLRKAIFLEVEELFDLPLQTKQRVVSSKPYHGYVGPLQLYESMGIDDVDVHDKVESLIKILWPQGKPGFSKNLQSFTEQVTRLDQIIRKMILESLGIEKYMDEHMNSTNYLARLIKYQGPQTNEAKVGIGEHTDKNILTTLCQNQIDGLEVQTKSGEWIKCKPSTPSSFVVVTGDTLYAWTNGRVHTPAHRVMMSGNETRFSIGLFTVPKPGFIIKAPDELVTEEHPLLFKPFVQSEFMKFLRSSESTKNALKVYCGV* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1119 310 Gene3D - 1 299 IPR027443 -
Gso19g1119 310 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 309 - -
Gso19g1119 310 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 4 309 - -
Gso19g1119 310 SUPERFAMILY Clavaminate synthase-like 6 295 - -
Gso19g1119 310 Pfam 2OG-Fe(II) oxygenase superfamily 156 259 IPR044861 -
Gso19g1119 310 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 88 IPR026992 -
Gso19g1119 310 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 160 261 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1119 Gso-Chr19 39357843 39360380 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1119 3 290 Glycosyltransferase AT5G59530 23.684 2.34e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1119 - - gmx:100817152 622.468