Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1118 ATGAAAAACAAAATCTTGGGAGGAAGCCAACACCATCTAGCTTTCCACACACAAATTCTTTTCAGCATGGGATCCCAAACACAGTCTCAACTTCATGTGGTGGACTTCACCGACGAAAACATGAAGCCTGGCACCGATGCATGGCTCTCAGCGTGCAGTGTTGTGAGGACTGAACTTGAGAACAATGGTTTTTTCATGGCACGCTATGATAAAGTTGGCAAAGAGCTATGCGACTCTGTTGTATTTGCAGTGGAAGAGTTTTTTGGTCTCCCAGTGGAGACAAAAGCGCAAAAGACTAGTGACAAACCTTTCCATGGCTACTTAGGGCAAGTCTCGTGGCTTCCCTTGTATGAATCTGTGGGCATTGATGATCCGTTGACCTTACAAGGGTGTCAAAAATTCGCCCACATAATGTGGCCGGAGGGGAATGGTCGTTTCTGTGAAAGCATCAATGAGTATGCTAAGTTGTTAGGAGAATTAGACCATATGGCGAAGAGAATGGTGTTTGAGAGCTATGGTGTGGACATGCAACGATGCGATTCTTTCATAGAATCAAACGATTATCTACTTCGATGCATGAAGTATAGAACACCCCAGATGGATGAAAATGATTTGGGACTGCAACCTCACTCGGACTTGACCATCACATCCATTGTACATCAGCTGAATAATCTGAATGGCTTGGAAATCAAACTGAAGGATGGGGAATGGAAAGAGATTGATGCTTCACCTTCCTTGTTTGTGGTTATGGCAGGTGACGCATTCAATGTGTGGAGTAATGGCAGGATACGGCCATGTGAACACAGAGTGACGATGAATGGAAAGAAAAGCAGATACTCTATGGGACTGTTTTCTTTTGGTGGTAATAAGATGATGCGTATACCAGATGAGCTAGTTAACGATCAACATCCCTTGCGTTATAAACCAATATTCGATCATTATGAATACCTTCGTTTCTATGACAAAGAGAAAATCAAAGAGCCTTATTCTCGAATCCAAGCCTACTGTGGAATCTCATCCCTACAATAG 1029 0.4315 MKNKILGGSQHHLAFHTQILFSMGSQTQSQLHVVDFTDENMKPGTDAWLSACSVVRTELENNGFFMARYDKVGKELCDSVVFAVEEFFGLPVETKAQKTSDKPFHGYLGQVSWLPLYESVGIDDPLTLQGCQKFAHIMWPEGNGRFCESINEYAKLLGELDHMAKRMVFESYGVDMQRCDSFIESNDYLLRCMKYRTPQMDENDLGLQPHSDLTITSIVHQLNNLNGLEIKLKDGEWKEIDASPSLFVVMAGDAFNVWSNGRIRPCEHRVTMNGKKSRYSMGLFSFGGNKMMRIPDELVNDQHPLRYKPIFDHYEYLRFYDKEKIKEPYSRIQAYCGISSLQ* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1118 342 Pfam non-haem dioxygenase in morphine synthesis N-terminal 46 107 IPR026992 -
Gso19g1118 342 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 185 287 IPR005123 -
Gso19g1118 342 Pfam 2OG-Fe(II) oxygenase superfamily 197 285 IPR044861 -
Gso19g1118 342 SUPERFAMILY Clavaminate synthase-like 17 324 - -
Gso19g1118 342 Gene3D - 9 325 IPR027443 -
Gso19g1118 342 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 26 337 - -
Gso19g1118 342 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 26 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1118 Gso-Chr19 39351707 39354998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1118 140 308 Glycosyltransferase AT5G59530 27.011 3.24e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1118 - - gmx:100775440 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1118 19 39351707 39354998 Gso3g1124 3 36549037 36552101 GST