Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1105 ATGGGTTGCTCAGCCTCAAGAACCATCACCATAGTGGCCAACAACAATAACCAATTAGAGGATCCATCTTCTGCTTCTCTTGCTTCTTCTTTCTCTTCCTCTTCTGCCTCACACAAATCCATTAACTCTACTTCTTCACCAGCAGCAGCACCAGTTAGAAGAAGAGCTCTTTCTCTCCCAATGCCTCTTGTTCATCACCCTCCCATAAAAAAGGGTGACACACACCACCTTGTCTCCCTCACCTCCACCACCTATGGCTCCCTTCTCCTCATTGACCAAAAAGACCCAAACTTGACCCAAAAAAACCAACCCCGCCTCACCAAAACCTCAAACCAAACTGACCCAGCACACTCACTCTCCCCAGACTCAGTCATCAACACTTGGGAACTCATGGATGGCTTAGATGAAGAAGAAGAAGAAGAAGAAGAAATTGCCAATGCCAAGAAGAAGCCTCCTTACACTTCCATTTTGGACAAACCAAGTTCATGCAGGTACACAGCATTTGATGGTTCTGCAAGGAAGAAACTGCTTGATTCCTTTGAATCACTGAAAACTTCACAGACAGCAATGGAAAAGGAAAACTCTTCTTCTTCTCCAGCACCAACCAAGAAGCCACTTTGGCAGCACTTATCCGAGGAAGCTTTGCTTGCTAAGTTGGATCCGAGTGTGGCTTGGAGTTACAGAAGAGCATTATCATCAAGGAATCTAGGTAGAAACACCTTATCTAGAGATGTAAGGTCAATGGGGTCTAGCCCTTTGATATTTCATTCTTCTTCTTTTTCATTTGGTAAGAACAATAGTTTGTGCCGTTTGTCTGGCACTGAGGACAGAATAGTGCTTTATTGCACTAGTTTGAGAGGGATCCGAAAGACCTATGAGGATTGTTGTTCGGTTAGGATGATTCTGAGGGGCTTCAGGGTTGCGGTTGATGAGAGGGACATCTCAATGGACTCGTCCTATAGGAAGGAGTTGAAGGATGCTCTTGGTGGAAAAGCAGTGACATTGCCACAGGTCTTTATCAGAGGGAGGTATGTGGGGAATGCTGAGCAAATGAAGCATCTGAATGAGTCTGGAGAATTGGCAAGGCTTTTGGAGGGTTTCCCCACTCAGGATCCTGGGTTTGTGTGTGACAACTGTGGTGATGCCAGGTTTGTGCCATGCCCCAATTGCAATGGTAGCAGGAAGGTGTTTGAGCATGAGGAAGGAGGGTTGAGAAGGTGCCCTGATTGCAATGAGAATGGCTTGATAAGATGTCCAGGTTGCTGCCCATGA 1272 0.4607 MGCSASRTITIVANNNNQLEDPSSASLASSFSSSSASHKSINSTSSPAAAPVRRRALSLPMPLVHHPPIKKGDTHHLVSLTSTTYGSLLLIDQKDPNLTQKNQPRLTKTSNQTDPAHSLSPDSVINTWELMDGLDEEEEEEEEIANAKKKPPYTSILDKPSSCRYTAFDGSARKKLLDSFESLKTSQTAMEKENSSSSPAPTKKPLWQHLSEEALLAKLDPSVAWSYRRALSSRNLGRNTLSRDVRSMGSSPLIFHSSSFSFGKNNSLCRLSGTEDRIVLYCTSLRGIRKTYEDCCSVRMILRGFRVAVDERDISMDSSYRKELKDALGGKAVTLPQVFIRGRYVGNAEQMKHLNESGELARLLEGFPTQDPGFVCDNCGDARFVPCPNCNGSRKVFEHEEGGLRRCPDCNENGLIRCPGCCP* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1105 423 MobiDBLite consensus disorder prediction 18 49 - -
Gso19g1105 423 CDD GRX_GRX_like 277 418 - -
Gso19g1105 423 Gene3D Glutaredoxin 276 368 - -
Gso19g1105 423 MobiDBLite consensus disorder prediction 18 51 - -
Gso19g1105 423 Coils Coil 130 150 - -
Gso19g1105 423 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 40 422 - -
Gso19g1105 423 Pfam Glutaredoxin 279 345 IPR002109 -
Gso19g1105 423 PANTHER GLUTAREDOXIN FAMILY PROTEIN 40 422 - -
Gso19g1105 423 MobiDBLite consensus disorder prediction 185 204 - -
Gso19g1105 423 MobiDBLite consensus disorder prediction 95 121 - -
Gso19g1105 423 ProSiteProfiles Glutaredoxin domain profile. 266 371 - -
Gso19g1105 423 SUPERFAMILY Thioredoxin-like 274 365 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1105 Gso-Chr19 39149219 39151240 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1105 K17479 - gmx:100811817 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1105 19 39149219 39151240 Gso3g1110 3 36332539 36334627 GST