Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1076 ATGGCTATGCATAGGATTCTTCAAAGGGGTCGTCGATTCTTCAATCCTCCACCGCAACTTGTTACTGCTTTCTCAGGTTCTGCTGCTTTTCACGCATTTCCCTCTCATGGGGTTGAATCTCCTCATGTTCGGGAAATTACAAACACAAGAGAAGTTAAGAATGACTTTGACAAATACCATGTAAAGGGTTTATCTCGATGCCTGAACTGGACTTCAAGGTCAAATGCCAATAGTCAAGCATCCTGCTATGTGGTAAATCGTCATTTTGCATCTGATTGCAATGATATATGCTCAAAGGAGTTCTCAAGTAAGCTTCTTACAAGTATTCCAGACTATGTAAAGATAGTGGAAGTTGGTGCAAGGGATGGATTGCAAAATGAGAAGGCCATTATTCCTACTAATGTAAAAGTTGAGTTAATAAAACTGCTAGTTTCTTCTGGGTTGTCAGTTGTTGAGGCGACAAGTTTTGTCTCACCAAAATGGGTACCCCAGTTGGCAGATGCAAAGGATGTACTGGCAGCAATTCAAAATGTTGAAGGTGCTAGGTTTCCTGTCTTGACTCCAAACCTTAAAGGCTTTGAGGCAGCTGTTGCTGCTGGAGCTAAAGAAGTGGCTGTTTTTCCTGCAGCTTCTGAATCATTCTCAAAAGCAAATCTGAATTCTAGCATTGAGGATAATCTTGCTCGTTGCCACGATATTGCTTCAGCTGCTAGAAGCCTCTCGATCCCAGTTCGTGGATATATATCATGTGTTGTCGGATGTCCTCTGGAAGGAAATATTGCTCCAGCAAAAGTTGCATATGTGGCAAAATCGCTTTATGAGATGGGTTGCTCAGAGATTTCACTGGGGGATACAATCGGTGTTGGCACACCTGGTACTGTCATTTCAATGCTTGAAGCTGTTCTTGATGTTGTTCCAACTGACATGCTTGCTGTCCACTTTCATGATACTTATGGTCAGGCACTTTCAAATATTTTAATTTCACTTCAGATGGGGATCAGCACAGTGGATTCATCTGTTTCTGGTCTTGGAGGTTGTCCATATGCCAAGGGTGCAACTGGGAATGTAGCCACTGAGGATGTCGTTTACATGCTGAATGGACTTGGAGTGAAAACAAATGTGGACCTTGGAAAGCTTATGCTTGCTGGGGATTTCATCTGCAAGCATTTAGGACGTGCATCTGGTTCAAAAGCAGCTACTGCTTTGAGTAAAGTTACAAGTCATGCCTCCAAACTATAA 1239 0.4253 MAMHRILQRGRRFFNPPPQLVTAFSGSAAFHAFPSHGVESPHVREITNTREVKNDFDKYHVKGLSRCLNWTSRSNANSQASCYVVNRHFASDCNDICSKEFSSKLLTSIPDYVKIVEVGARDGLQNEKAIIPTNVKVELIKLLVSSGLSVVEATSFVSPKWVPQLADAKDVLAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAVFPAASESFSKANLNSSIEDNLARCHDIASAARSLSIPVRGYISCVVGCPLEGNIAPAKVAYVAKSLYEMGCSEISLGDTIGVGTPGTVISMLEAVLDVVPTDMLAVHFHDTYGQALSNILISLQMGISTVDSSVSGLGGCPYAKGATGNVATEDVVYMLNGLGVKTNVDLGKLMLAGDFICKHLGRASGSKAATALSKVTSHASKL* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1076 412 ProSiteProfiles Pyruvate carboxyltransferase domain. 113 380 IPR000891 GO:0003824
Gso19g1076 412 CDD DRE_TIM_HMGL 115 388 - -
Gso19g1076 412 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 40 412 IPR043594 GO:0016833
Gso19g1076 412 Pfam HMGL-like 113 385 IPR000891 GO:0003824
Gso19g1076 412 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 40 412 - -
Gso19g1076 412 Gene3D Aldolase class I 106 405 IPR013785 -
Gso19g1076 412 SUPERFAMILY Aldolase 108 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1076 Gso-Chr19 38682348 38689401 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1076 K01640 - gmx:100801507 808.905