Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso19g1054 | ATGACTGCTCAGACCCAAGAGGAGCTTCTTGCGCAACACCTCGAACAGCAAAAGATCCATGATGGTGAACCTGTTGTCGAGGATGATGATGATGAGGAAGAGGATGATGATGATGATGATGATGAGGATGATGACCATGCCGAAGGACTAGAAGGTGATGCATCTGGTAGGTCGAAGCAGACCAGAAGTGAAAAGAAGAGTCGCAAGGCAATGCTTAAACTTGGAATGAAACCTGTCACAGGTGTCAGCCGAGTGACAGTCAAGAAGAGCAAGAATATCCTGTTCGTTATCTCAAAACCAGATGTTTTCAAGAGTCCAACATCTGAAACTTACATTATATTTGGGGAAGCCAAGATTGAAGACTTGAGCTCACAGTTACAAACTCAGGCGGCAGAGCAATTCAAGGCTCCTAATTTGAGCAATGTTGGATTGAAGCCCGAATCTTCTGCTGTTGCTCAAGATGATGAGGAAGTGGATGAGGCTGGCGTAGATCCCAAGGACATAGAGTTGGTGATGACTCAAGCTGGTGTGTCAAGGCCTAAAGCTGTTAAAGCTCTCAAGGCGGCCAGTGGCGACATTGTTGCTGCCATTATGGAGCTAACTAATTAA | 609 | 0.4581 | MTAQTQEELLAQHLEQQKIHDGEPVVEDDDDEEEDDDDDDDEDDDHAEGLEGDASGRSKQTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSETYIIFGEAKIEDLSSQLQTQAAEQFKAPNLSNVGLKPESSAVAQDDEEVDEAGVDPKDIELVMTQAGVSRPKAVKALKAASGDIVAAIMELTN* | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso19g1054 | 202 | MobiDBLite | consensus disorder prediction | 50 | 71 | - | - | |
| Gso19g1054 | 202 | Pfam | HYPK UBA domain | 163 | 201 | IPR044034 | - | |
| Gso19g1054 | 202 | Gene3D | - | 163 | 200 | - | - | |
| Gso19g1054 | 202 | MobiDBLite | consensus disorder prediction | 25 | 49 | - | - | |
| Gso19g1054 | 202 | MobiDBLite | consensus disorder prediction | 11 | 73 | - | - | |
| Gso19g1054 | 202 | Pfam | NAC domain | 64 | 119 | IPR002715 | - | |
| Gso19g1054 | 202 | Gene3D | - | 70 | 123 | IPR038187 | - | |
| Gso19g1054 | 202 | ProSiteProfiles | NAC A/B domain profile. | 61 | 126 | IPR002715 | - | |
| Gso19g1054 | 202 | PANTHER | NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN | 3 | 202 | - | - | |
| Gso19g1054 | 202 | SMART | NAC_2 | 64 | 120 | IPR002715 | - | |
| Gso19g1054 | 202 | CDD | UBA_NACA_NACP1 | 156 | 201 | - | - | |
| Gso19g1054 | 202 | PANTHER | NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED | 3 | 202 | IPR016641 | GO:0005854 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso19g1054 | Gso-Chr19 | 38277072 | 38279883 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso19g1054 | K03626 | - | gmx:100791446 | 341.658 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso19g1054 | 19 | 38277072 | 38279883 | Gso3g1041 | 3 | 35183764 | 35186244 | GST |