Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1046 ATGGGTTCATCCAAGGCCTTATGCAGTGTTTCTCTGCTCCATTTGTTCATAGTGGTTTGCCTTGTCTTCCAATGCTTTGCTACTAAAAACCATGCTGACCTGACCACAACTCTAACTGTGAATGCTTCTGATGCATCTGGAAAGCCAATACCAGAGACACTTTTTGGCATATTCTTTGAGGAGATTAATCATGCTGGAGCTGGGGGATTGTGGGCTGAGCTTGTGAGCAACAGAGGATTTGAAGCTGGCGGTCCTAACACTCCTTCAAATATTGATCCTTGGTCAATTATTGGAAATGAATCATTGATAAATGTTGAAACTGATCGTACCTCTTGCTTTGACCGTAATAAGGTTGCACTTCGATTGGAGGTATCATGTGACAGCGAAGGTGACAACATCTGCCCAGCTGATGGTGTTGGTGTTTATAATCCTGGTTTCTGGGGCATGAATATTGAGCAAGGGAAGAAATACAAAGTGGTCTTCTATGTTCGTTCAACTGAATCACTTAATCTAACAGTTTCATTGACTGGATCCAATGGTGTAGGAAACCTGGCTTCATCTGTGATCACAGGTTCTGCACTTGATTTTTCAAACTGGACAAAGGTGGAGAAGATACTGGTTGCCAAGGCAACAGATAATAACTCAAGACTTCAATTAACAACCACCACCAAAGGTGTGATATGGTTGGACCAAGTGTCTGCTATGCCACTGGACACATATAAGGGACATGGTTTCCGAACTGACCTTGTTGAAATGCTGACAGCTTTGAAACCAAGATTTATCAGATTTCCGGGCGGTTGTTTTGTTGAAGGAGAATGGTTAAGAAATGCATTTCGATGGAAAACATCCATTGGACCATGGGAGGAGAGACCTGGGCACTTTGGTGATGTTTGGATGTACTGGACTGATGATGGACTTGGTTATTATGAGTTTCTCCAACTTGCAGAGGACTTGGGTGCTTCACCAATATGGGTATTTAATAATGGTGTCAGTCATAATGATCAAGTTGATACATCGGCGGTCTTACCTCTTGTGCAAGAAGCCCTTGATGGAATTGAGTTCGCGAGAGGTGATCCCACTTCAAAATGGGGTTCCCTTAGAGCTGCTATGGGACATCCTGAGCCATTTGACCTCAGATATGTTGCTGTTGGGAATGAAGATTGTGGAAAAAAGAATTATCGAGGAAACTACCTGAAATTCTATAGTGCAATAAAAAGTGCTTATCCAGATATCCAAATTATCTCAAACTGTGATGGTTCTTCTCGACCTTTAGATCATCCAGCTGATATGTATGATTATCATGTTTATACAAATGCGAATGACATGTTTTCTAGAGCTAACACATTTGATCATACATCACGAAATGGTCCAAAGGCTTTTGTAAGTGAGTATGCCGTGACTGGAAAAGATGCTGGGACAGGAAGCCTCTTGGCAGCCCTAGCTGAAGCTGGCTTCCTAATTGGACTGGAAAAGAACAGTGATGTTATCCAAATGGCCAGCTATGCTCCACTTTTTGTTAATGCCAATGATAGGAGGTGGAACCCGGATGCAATTGTATTCAACTCCTTTCAGCTCTATGGAACTCCTAGCTATTGGGTGCAACTATTTTTCTCAGAGTCAAGTGGAGCAACACTTCTAAGTACATCACTTCAAGCACCTTCCTCAAATTCACTTGTTGCATCAGCAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAGGTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGACTGGAACCAAACTCATTGCAGTTATCTGGGTCAACAAAGACTGTGCTTACATCTGCAAATGTAATGGATGAGAACTCCTTCTCACAGCCAAAGAAGGTGGTGCCAATCCAAAGTCTACTTCAGAATGTTGAGAAGGACATGAATGTCACAGTCCCACCTCGTTCGTTCACATCATTTGATCTGCTGAAACAATCCAGTAATTTGAAGATGGCAGGGAGCGATTCTTCCACGTGGTCTTCTATTTAA 2031 0.4205 MGSSKALCSVSLLHLFIVVCLVFQCFATKNHADLTTTLTVNASDASGKPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWSIIGNESLINVETDRTSCFDRNKVALRLEVSCDSEGDNICPADGVGVYNPGFWGMNIEQGKKYKVVFYVRSTESLNLTVSLTGSNGVGNLASSVITGSALDFSNWTKVEKILVAKATDNNSRLQLTTTTKGVIWLDQVSAMPLDTYKGHGFRTDLVEMLTALKPRFIRFPGGCFVEGEWLRNAFRWKTSIGPWEERPGHFGDVWMYWTDDGLGYYEFLQLAEDLGASPIWVFNNGVSHNDQVDTSAVLPLVQEALDGIEFARGDPTSKWGSLRAAMGHPEPFDLRYVAVGNEDCGKKNYRGNYLKFYSAIKSAYPDIQIISNCDGSSRPLDHPADMYDYHVYTNANDMFSRANTFDHTSRNGPKAFVSEYAVTGKDAGTGSLLAALAEAGFLIGLEKNSDVIQMASYAPLFVNANDRRWNPDAIVFNSFQLYGTPSYWVQLFFSESSGATLLSTSLQAPSSNSLVASAITFQNSVDKKNYIRIKVVNFGTTAVNLKISLDGLEPNSLQLSGSTKTVLTSANVMDENSFSQPKKVVPIQSLLQNVEKDMNVTVPPRSFTSFDLLKQSSNLKMAGSDSSTWSSI* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1046 676 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 1 671 - -
Gso19g1046 676 SUPERFAMILY Galactose-binding domain-like 73 233 IPR008979 -
Gso19g1046 676 Pfam Carbohydrate binding domain 73 221 IPR003305 GO:0016798
Gso19g1046 676 Gene3D Glycosidases 219 537 - -
Gso19g1046 676 Pfam Alpha-L-arabinofuranosidase C-terminal domain 463 650 IPR010720 GO:0046373|GO:0046556
Gso19g1046 676 SUPERFAMILY (Trans)glycosidases 213 545 IPR017853 -
Gso19g1046 676 Gene3D - 538 657 IPR013780 -
Gso19g1046 676 SMART alpha_l_af_c 462 650 IPR010720 GO:0046373|GO:0046556
Gso19g1046 676 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1-LIKE 1 671 - -
Gso19g1046 676 SUPERFAMILY Glycosyl hydrolase domain 528 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1046 Gso-Chr19 38174790 38184868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1046 1 672 Glycoside Hydrolase AT3G10740 69.185 0.0 988
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1046 K01209 - gmx:100787207 1372.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1046 19 38174790 38184868 Gso3g1034 3 35052017 35061665 GST