Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1018 ATGAGCAACAACATATTTGATGGACAGTTGTTAGCCGAGAAGTTGTTGAAACTTAACAATTCACAACAAAGCATTGAATCACTGTCCCATTGGTGTATTTCTCACCGGAAGAGAGCTAAAGAAATAGTTGAAACTTGGGATAAATTGTTCAATGCTTCCCAGAAAGAGCAGCGTATCTCTTTTCTATACTTGGCTAATGACATCTTGCAAAATAGTAGGCGAAAGGGCAGTGAGTTTGTCAATGAATTCTGGAAAGTTCTCCCAGCAGCTCTCAGGCATGTTTATGAAAGTGGTGATGAAAATGGAAGGAAAGCAGTGACCAGACTAGTTGACATATGGGAAGAGAGGAAGGTTTTTGGTTCACGAGGTCAAGGTCTTAAGGATGACGTAATGGGCAAGAATCCCCTTCCATCTGCAAGCAATGGAAAGAGTTCAAATTCTATCAAGACAGTGAAGAGGGATGCCCACTCAGTGAGAATAAAACTGGCTGTTGGGTGTTTGCCAGAGAAAATACTAACAGCATTTCAGCCTGTTCTTGATGAACATCTTAATGAGAAAGATGCTTTAAACAACTGCAGTGCTGCTGTGCGCGAAGTGGGTAAAGTTGTGGAAGATGTTGAAAATACATTGGCTCATGGAAACCAGTTGGAATCTACTTTGGTGAATGACTTACAGGAGCAGGAAAAAAAGCTTAAACAATATATGGAGCAACTTGAAAATGGGGAGGCTGCAAGGGCTTCATTGCTTTCTCAGCTTAAACATGCACTTCAGGAACAAGAATCAAGGCAAGAGCTTGTTCACACCCAGTTGCTAGTTGCACGAGGCCAGATCGAAAAAGTTGTTGGTATCAGGAAGCAGCTTAACCAAGCAGCAGAAGCCACAGATCCATCTCAGCCTACTTCTGTTCAATCTTCTGTATCATATGCTCCTTTCCAAACTACTGAAGATGATAACAAGAAGGCAGCAGCAGCTGCCGTTGCTGCTAAGCTTGCTGCCTCTGCATCCTCTGCCCAGATGCTTACATCCGTTCTTTCTTCTCTTGTTGCGGAAGAAGCTGCCTCCTTGAATGGTAGCTTAAATTCTACAGGATTTTCATCAGTATTACCTATTTTCAACCCAGAGAAAAGACCCAAACTTGAAAAACCAACGCCTGCTCATGATGTTAGCAATTATGATATGGCCAACTCTCCCTTTTATGCCACTATGCAACAGCCACCAGTGCCTAATGTACCACTTACACTGCCAGTTGGCATGCAAACCGTATCTCAAGCCAATCAATTACAAGTTGCATTTGCTTCACCTCCCCCTCCCCTGCCTCATTCTTCGGCATATCAACCATCAAACCAATATGTCCAATCAACTGGTTTGATGGCTGGGGGAATTCCTTATGGATACGGGTCAAATAGCCTGCCACCTCCACCTCCACCTCCTTTGCCTCCACACGTGACAATAGGTTTATCAATGCCTGGCCCTCAACCAGCGCAGCAGCAACAGCAGTCTCCACCGGGATTTTACAGGCCACCTGGCATAGGGTTTTATGGGCAAAGCCACCTATCAACACCACCACCAGTACCTAGGCAGTGA 1584 0.4451 MSNNIFDGQLLAEKLLKLNNSQQSIESLSHWCISHRKRAKEIVETWDKLFNASQKEQRISFLYLANDILQNSRRKGSEFVNEFWKVLPAALRHVYESGDENGRKAVTRLVDIWEERKVFGSRGQGLKDDVMGKNPLPSASNGKSSNSIKTVKRDAHSVRIKLAVGCLPEKILTAFQPVLDEHLNEKDALNNCSAAVREVGKVVEDVENTLAHGNQLESTLVNDLQEQEKKLKQYMEQLENGEAARASLLSQLKHALQEQESRQELVHTQLLVARGQIEKVVGIRKQLNQAAEATDPSQPTSVQSSVSYAPFQTTEDDNKKAAAAAVAAKLAASASSAQMLTSVLSSLVAEEAASLNGSLNSTGFSSVLPIFNPEKRPKLEKPTPAHDVSNYDMANSPFYATMQQPPVPNVPLTLPVGMQTVSQANQLQVAFASPPPPLPHSSAYQPSNQYVQSTGLMAGGIPYGYGSNSLPPPPPPPLPPHVTIGLSMPGPQPAQQQQQSPPGFYRPPGIGFYGQSHLSTPPPVPRQ* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1018 527 MobiDBLite consensus disorder prediction 467 486 - -
Gso19g1018 527 CDD CID_RPRD_like 9 131 - -
Gso19g1018 527 Coils Coil 217 251 - -
Gso19g1018 527 MobiDBLite consensus disorder prediction 489 503 - -
Gso19g1018 527 ProSiteProfiles CID domain profile. 3 135 IPR006569 -
Gso19g1018 527 Pfam CID domain 10 121 IPR006569 -
Gso19g1018 527 MobiDBLite consensus disorder prediction 464 527 - -
Gso19g1018 527 SMART 558neu5 10 131 IPR006569 -
Gso19g1018 527 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 527 - -
Gso19g1018 527 Gene3D - 4 131 IPR008942 -
Gso19g1018 527 SUPERFAMILY ENTH/VHS domain 16 118 IPR008942 -
Gso19g1018 527 PANTHER RNA POLYMERASE II-BINDING DOMAIN PROTEIN 1 527 - -
Gso19g1018 527 MobiDBLite consensus disorder prediction 129 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1018 Gso-Chr19 37823883 37848361 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1018 K15559 - gmx:100800067 956.822
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1018 19 37823883 37848361 Gso16g0432 16 5020058 5035346 GST