Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1016 ATGGAGGGGAATCTAGAGAAGAAGCTGTTGAGCAGAGAAAAAAAATCAGAAGAAGAAGAAGAAGAAGAGAAATTATCATTGGTGAAGAGGGTGTGGGAAGAGAGCAAGGTGATGTGGATAGTGGCAGCACCAGCCATATTCACAAGGTTCACCACCTTTGGCATCAGTGTTATAAGCCAAGCATTTATTGGTCATATTGGTTCAAGGGAACTCGCTGCTTATGCTCTTGTGTTCACTGTCATCATACGCTTTGCCAATGGTATTCTGTTAGGAATGGCAAGTGCGTTGTCAACACTTTGTGGACAAGCATACGGTGCAAAAGAATATGACATGATGGGAGTGTATCTTCAAAGATCATGGATAGTTTTATTCTTAACTGCAATCTGTCTTCTTCCCCTGTTGATCTTCACAAGCCCAATTTTGACTATCTTAGGCCAAGATGAGAGCATAGGACAAGTGGCAGGAACCATTTCTCTTTGGTCAATTCCTATCTTATTTGCTTATATTGTCTCAAACAACTGCCAGACATTCCTTCAATCTCAAAGCAAGAATGTCATTATTTCATTTTTGGCAGCTTTATCAATAATCATTCATGTGTCCCTCTCTTGGCTATTCACAATGCAATTCAAGTATGGGATTCCTGGGGCAATGATTTCAACAATTTTGGCATACTGGATTCCGAATATTGGTCAACTAATATTTATTACATGTGGTTGGTGTCCTGAAACATGGAAAGGTTTCTCTGTTTTAGCATTCAAAGATCTTTGGCCTGTTGCCAAGCTTTCCATTTCATCTGGTGCCATGTTATGTCTTGAGTTCTGGTACAGCACAATATTGATTCTTTTGACTGGTAACATGAAAAACGCCGAGGTTCAAATTGATGCTCTATCTATATGTATTAACATCAATGGATGGGAAATGATGATAGCATTTGGTTTCATGGCTGCAGCAAGTGTTAGAGTGGCAAATGAACTTGGAAGAGGAAGCTCCAAAGCTGCAAAGTTCTCTATAGTTGTGACAGTGCTTACATCCTTTGTAATTGGGTTTATCTTATTTCTTCTTTTTTTGTTTTTAAGAGAAAAAGTAGCTTATCTCTTTACTTCCAACGAAGACGTGGCTACTGCTGTGGGGGATTTGTCACCTCTGTTAGCTGTTTCTTTGTTACTAAATAGTATTCAACCTGTACTCTCAGGAGTGGCTGTTGGAGCAGGCTGGCAGAGCACTGTAGCATATGTGAACATAGGATGTTATTACCTCATAGGTATCCCGGTTGGAATAGTGCTTGGTAACATTATTCATTTGCAAGTCAAGGGTATTTGGATTGGAATGTTGTTTGGGACACTAATTCAAACTATAGTCCTAACTATAATCACCTACAAAACTAATTGGGATGAGCAGGTAATTATAGCCCGTAGTCGTATTAATAAGTGGTCTAAAGTGGAATCTGATCATGAAACAACTACATCAGATAATTAG 1476 0.3916 MEGNLEKKLLSREKKSEEEEEEEKLSLVKRVWEESKVMWIVAAPAIFTRFTTFGISVISQAFIGHIGSRELAAYALVFTVIIRFANGILLGMASALSTLCGQAYGAKEYDMMGVYLQRSWIVLFLTAICLLPLLIFTSPILTILGQDESIGQVAGTISLWSIPILFAYIVSNNCQTFLQSQSKNVIISFLAALSIIIHVSLSWLFTMQFKYGIPGAMISTILAYWIPNIGQLIFITCGWCPETWKGFSVLAFKDLWPVAKLSISSGAMLCLEFWYSTILILLTGNMKNAEVQIDALSICININGWEMMIAFGFMAAASVRVANELGRGSSKAAKFSIVVTVLTSFVIGFILFLLFLFLREKVAYLFTSNEDVATAVGDLSPLLAVSLLLNSIQPVLSGVAVGAGWQSTVAYVNIGCYYLIGIPVGIVLGNIIHLQVKGIWIGMLFGTLIQTIVLTIITYKTNWDEQVIIARSRINKWSKVESDHETTTSDN* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1016 491 PANTHER PROTEIN DETOXIFICATION 16 476 - -
Gso19g1016 491 CDD MATE_eukaryotic 34 467 IPR045069 GO:0042910|GO:1990961
Gso19g1016 491 Pfam MatE 44 204 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso19g1016 491 Pfam MatE 267 426 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso19g1016 491 TIGRFAM matE: MATE efflux family protein 44 440 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso19g1016 491 PANTHER MULTIDRUG RESISTANCE PROTEIN 16 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1016 Gso-Chr19 37791736 37796597 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1016 K03327 - gmx:100777237 896.345