Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1015 ATGTCAAGTGCGTTGTCAACACTATGTGGACAAGCATACGGTGCAAAAGAATATGCTATGATGGGAGTGTATCTTCAAAGATCATGGATAGTTATGTCCTTAACTACACTCTTCCTTCTTCCGGTGTTCATCTTCACACGACCCATTTTGATGCTCTTAGGCCAAGATGAGATTATAGCAGAAGTGGCAGGAACCATTTCTCTTTGGTCAATTCCAATCATATTTGCTTTTATTGCCTCGTTCACTTGCCAAAATTTCCTGCAATCTCAAAGCAGGAACACCATCATTGCATTCTTGGCGGCTTTCTCAATAGTTATTCATGTGTTTCTCTCTTGGCTATTGACAATTCAATTCAAGCTCGAGATTCCTGGTGCAATGACTTCAACAAGTTTGGCATTCTGGATTCCTAATATTGGTCAACTAATATTTATTACATGTGGTTGGTGCTCTGATACATGGAAGGGTTTCTCATTTTTAGCATTCAAAGATCTTTGGCCTGTTGTCAAGCTTTCCCTTTCATCTGGTGTCATGTTATGTCTTGAGCTCTGGTACAACACAATATTGGTTCTCTTAACGGGCAACATGGAAAATGCTGAGGTCCAAATTGATGCTCTATCTATATGCCTCAACATCAATGGATGGGAAATGATGATATCACTTGGTTTCATGGCTGCTGCAAGTGTTCGAGTGGCAAACGAGCTTGGAAAAGGAAGCTCCAAGGCTGCAAAGTTCTCTATAGTTGTGACAGTGCTTACATCCTTCGCCATTGGATTCGTTCTCTTCTTATTTTTCTTATTTTTAAGGGAAAAACTTGCTTACATATTTACCACAAATAAAGACGTGGCCCAGGCTGTTGGTGACTTGTCACCTTTGTTGGCAATCTCTATTCTACTAAACAGTGTCCAACCTGTACTCTCGGGAGTTGCTATTGGAGCAGGGTGGCAAAGCATTGTAGCATATGTGAACATTGGGTGTTATTACATCATAGGTGTTCCTGTAGGAGTTCTACTTGGTAATGTTCTGAATTTGCAAGTCAAGGGTATTTGGATTGGAATGTTGTTTGGAACATTTATTCAAACTGTAGTGCTAATTGTAATCACCTACAAAACTGATTGGGACAAGCAGGTTATTATAACTCGTAATCGTATTAACAAGTGGTCTAAGGTGGAATCTGATCATGAAATAATTACATCAGATCATTAG 1203 0.3965 MSSALSTLCGQAYGAKEYAMMGVYLQRSWIVMSLTTLFLLPVFIFTRPILMLLGQDEIIAEVAGTISLWSIPIIFAFIASFTCQNFLQSQSRNTIIAFLAAFSIVIHVFLSWLLTIQFKLEIPGAMTSTSLAFWIPNIGQLIFITCGWCSDTWKGFSFLAFKDLWPVVKLSLSSGVMLCLELWYNTILVLLTGNMENAEVQIDALSICLNINGWEMMISLGFMAAASVRVANELGKGSSKAAKFSIVVTVLTSFAIGFVLFLFFLFLREKLAYIFTTNKDVAQAVGDLSPLLAISILLNSVQPVLSGVAIGAGWQSIVAYVNIGCYYIIGVPVGVLLGNVLNLQVKGIWIGMLFGTFIQTVVLIVITYKTDWDKQVIITRNRINKWSKVESDHEIITSDH* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1015 400 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 387 - -
Gso19g1015 400 CDD MATE_eukaryotic 1 376 IPR045069 GO:0042910|GO:1990961
Gso19g1015 400 TIGRFAM matE: MATE efflux family protein 1 349 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso19g1015 400 Pfam MatE 1 113 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso19g1015 400 Pfam MatE 176 335 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso19g1015 400 PANTHER PROTEIN DETOXIFICATION 1 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1015 Gso-Chr19 37772719 37775156 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1015 K03327 - gmx:100797962 734.561