Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1012 ATGGAGGGGCATCTAAAGCAGAAGCTGTTGAGAAACAAAGAGAGAAGAACATCATCAGAGCAAGAAGAAGAGGAGCTATCATTAGTGAAGAGGGTGTGGAATGAGAGCCAGGTGATGTGGATAGTGGCGGCACCAGCCATATTCACTAGGTTCTCCACCTTCGGAATCAGTGTCATAAGCCAAGCCTTTGTTGGCCATATTGGCTCTAAGGAATTGGCTGCATATGCTCTCGTTTTCACCGTTCTCGTTAGGTTCGCCAATGGTGTTCTCTTAGGAATGGCGAGTGCGTTGTCAACACTTTGTGGACAAGCATATGGTGCAAAAGAATATGGCATGATGGGAGTGTATCTTCAAAGATCATGGATAGTTTTGTTCCTAACTGCAGTCTGTCTTCTTCCGGTGTTCATCTTCACAAGCCCAATTTTGATGCTCTTGGGCCAAGATGAGAGCATAGCACAAGTGGCAGGAAACATTGCTCTTTGGTCAATTCCTGTCATGTTTGCCTCCATTGTCTCGTTCACTTGTCAGACATTCCTTCAATCTCAAAGCAAGAATGTCATCATTGCGTTCTTGGCAGCATTTTCGATAGTCATTCACGTGTTTCTATCGTGGCTTTTGACAATGAAGTTCCAGTTTGGGATTCCTGGTGCAATGATTTCAGCAGGCTTGGCATACTGGATTCCCAACATTGGTCAACTCATATTTGTCACCTGTGGTTGGTGTTCTGATACATGGGAAGGTTTCTCATTTTTGGCATTCAAAGACCTCTGGCCTGTTGTCAAGATGTCCCTTTCAGCTGGTGCTATGTTATGTCTTGAGCTCTGGTACAACACAATATTGGTTCTTTTGACTGGTAACATGAAAAACGCAGAGGTTGAAATTGATGCTCTATCCATATGTCTCAACATCAATGGATGGGAAATGATGATATCACTTGGTTTCATGGCTGCAGCAAGTGTTCGAGTAGCAAATGAGCTTGGAAGAGGAAGTGCCAAAGCTGCAAAGTTCTCTATTATTGTGTCAGTGCTCACATCATTGGCCATTGGATTCCTTCTGTTCTTATTCTTCTTATTTTTTAGAGAAAGACTTGCATATATATTTACCTCAAATAAAGATGTGGCCTTTGCTGTTGGGGATTTGTCACCTTTGTTATCAGTCTCTATATTACTAAACAGTGTTCAACCTGTACTCTCAGGAGTGGCTATAGGAGCAGGGTGGCAAAGCATTGTAGCATATGTGAATATGGGGTGTTATTACGCCATTGGTATTCCTGTAGGTATTGTACTTGGCAACGTTCTCGATTTGCAAGTCAAGGGAATATGGATTGGAATGTTGTTTGGAACGTTGATTCAAACTATAGTGCTAATTGTAATCACCTATAAAACTAATTGGGATGAGCAGGTTACCATTGCTCAGAAGCGTATTAGCAGGTGGTCGAAGGTGGACAGTGCTGATCAAGAAAATGAAGCACAAAGAAAATATGTTAGCTAA 1491 0.4232 MEGHLKQKLLRNKERRTSSEQEEEELSLVKRVWNESQVMWIVAAPAIFTRFSTFGISVISQAFVGHIGSKELAAYALVFTVLVRFANGVLLGMASALSTLCGQAYGAKEYGMMGVYLQRSWIVLFLTAVCLLPVFIFTSPILMLLGQDESIAQVAGNIALWSIPVMFASIVSFTCQTFLQSQSKNVIIAFLAAFSIVIHVFLSWLLTMKFQFGIPGAMISAGLAYWIPNIGQLIFVTCGWCSDTWEGFSFLAFKDLWPVVKMSLSAGAMLCLELWYNTILVLLTGNMKNAEVEIDALSICLNINGWEMMISLGFMAAASVRVANELGRGSAKAAKFSIIVSVLTSLAIGFLLFLFFLFFRERLAYIFTSNKDVAFAVGDLSPLLSVSILLNSVQPVLSGVAIGAGWQSIVAYVNMGCYYAIGIPVGIVLGNVLDLQVKGIWIGMLFGTLIQTIVLIVITYKTNWDEQVTIAQKRISRWSKVDSADQENEAQRKYVS* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1012 496 PANTHER MULTIDRUG RESISTANCE PROTEIN 16 479 - -
Gso19g1012 496 CDD MATE_eukaryotic 35 468 IPR045069 GO:0042910|GO:1990961
Gso19g1012 496 Pfam MatE 268 427 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso19g1012 496 Pfam MatE 45 205 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso19g1012 496 TIGRFAM matE: MATE efflux family protein 45 441 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso19g1012 496 PANTHER PROTEIN DETOXIFICATION 16 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1012 Gso-Chr19 37692291 37696458 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1012 K03327 - gmx:100796360 939.102