Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1011 ATGGAAATGGAAGAGGAGCTAAAGGAGACGCTTATGCATCATCCAAACAACACTTCTTTGGAGAGTGTTGAAAAGGAAGAGTCATTGAGGAAAAGGGCATGGGAAGAAAGCAAGAAGATGTGGGTGGTAGCAGGCCCTGCCATATTCACAAGGTTTTCAACGTTTGGAATCATGGTGGTTAGTCAATCCTTCATTGGGCATATTGGCTCAACTGAACTAGCTGCCTATGCCATTGTTATGACTGTCCTAGTCAGGTTTGCAAATGGTGTATTGATTGGAATGGCAAGTGCATTGGATACTCTTTGTGGGCAAGCATATGGGGCCAAAAAATATGACATGCTAGGAGTGTATCTTCAAAGATCATGGATAGTGTTGTTCATGACCTCAATACTCCTTCTTCCTATTTACATCTTTACCACTCCTTTGTTAGAGGCTCTAGGCCAAGATAAAACCATTGCTCAAGTTGCTGGAAGCATTTCTCTGTGGTCAATAGGTATAATATTTGCTTTCTCTGTCTCATTCACCAGCCAAATGTTCCTACAATCACAGAGCAAGAACAAGATCATTGCCTACCTTGCAGCAGTTTCAATTTCAATTCATGTTTTGTTGTCATGGCTTTTAACTGTTCAGTTCAAGTTTGGGCTCAACGGTGCAATGACATCAACACTTTTAGCATATTGGATTCCTAACATTGGCCAGCTTGTGTTTATAATGACTAAGTGCCCTGACACATGGAAAGGTTTCTCATTCTTGGCCTTCAAAGATCTTTTGCCTGTTATCAAGCTTTCCCTCTCTTCTGGAGCTATGTTATGTCTTGAGATCTGGTACAACACTGTTTTGATTCTTCTTACAGGCAACATGAAAAATGCTGAAGTGTCTATTGATGCTCTGGCCATATGCCTCAACATTAGTGGGTGGGAAATGATGATAGCCCTTGGTTTCTTTGCTGCAGCAAGCGTTCGGGTGGCAAATGAGCTTGGAAGAGGGAGTTCAAAGGCTACAAAATTTTCCATTCTGATAACAGTCCTCACATCATTTTCCATTGGATTCGTGTTATTCTTGGTGTTCCTATTTCTGAGGGGAAAACTTGCTTACATTTTCACTCCAGACCCTGAGGTTGCTAAAGCTGTTGGCGATTTATCACCATTGCTCTCATTTTCCTTCTTGTTGAACAGTGTCCAACCTGTGCTTTCTGGAGTTTCTGTGGGTGCTGGGTGGCAAAGCGTTGTAGCATATGTAAACATAGGCTGCTATTATCTTATTGGTATTCCTGTTGGAGTGCTGCTTGATAATCTTTTCCATTTGGAAGTTAAGGGTATTTGGATTGGAATGTTGTTTGGAACATTTGTTCAAACCGTAATGCTTATTACAATCACATTTAAAACTGATTGGGACAAGCAGGTAGAGATAGCTCGAAATCGTGTTAACAAATGGGCAGTGACGACGGAGAACGAAGAATCAAACAGTAGATCAAGCATATCTAGCTAG 1488 0.4133 MEMEEELKETLMHHPNNTSLESVEKEESLRKRAWEESKKMWVVAGPAIFTRFSTFGIMVVSQSFIGHIGSTELAAYAIVMTVLVRFANGVLIGMASALDTLCGQAYGAKKYDMLGVYLQRSWIVLFMTSILLLPIYIFTTPLLEALGQDKTIAQVAGSISLWSIGIIFAFSVSFTSQMFLQSQSKNKIIAYLAAVSISIHVLLSWLLTVQFKFGLNGAMTSTLLAYWIPNIGQLVFIMTKCPDTWKGFSFLAFKDLLPVIKLSLSSGAMLCLEIWYNTVLILLTGNMKNAEVSIDALAICLNISGWEMMIALGFFAAASVRVANELGRGSSKATKFSILITVLTSFSIGFVLFLVFLFLRGKLAYIFTPDPEVAKAVGDLSPLLSFSFLLNSVQPVLSGVSVGAGWQSVVAYVNIGCYYLIGIPVGVLLDNLFHLEVKGIWIGMLFGTFVQTVMLITITFKTDWDKQVEIARNRVNKWAVTTENEESNSRSSISS* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1011 495 PANTHER PROTEIN DETOXIFICATION 21 480 - -
Gso19g1011 495 MobiDBLite consensus disorder prediction 1 25 - -
Gso19g1011 495 TIGRFAM matE: MATE efflux family protein 46 441 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso19g1011 495 CDD MATE_eukaryotic 36 469 IPR045069 GO:0042910|GO:1990961
Gso19g1011 495 PANTHER MULTIDRUG RESISTANCE PROTEIN 21 480 - -
Gso19g1011 495 Pfam MatE 46 206 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso19g1011 495 Pfam MatE 268 427 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1011 Gso-Chr19 37683409 37688377 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1011 K03327 - gmx:100775619 913.679