Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0983 ATGTATCTTCCCCGCCACCACATCCTCACCAGACTCTCCCCTTATCGCCGCCACTTCTCCCACTCCGCCGCCGCCGTCCTCCGGCCTCCGGGGCCGGAGCCCCTCACCTACCTGGACGGCTTCCCCCGCCCCGATCCCAAGCACGACGAGACGATCCTCGCCATCCCCCGCGCCGACTCCGGCAAGAACATCTCCACCAAGGAACGCCGCGCCGGGCGGCTTCCGAGCATCGTGTTCGAGCAAGAAGACGGCCAGCACGGCGGCAACAAGCGCCTCATCTCCGTCCGCACTGACCAGATCAGAAAACTCGTCAACCACCTCGGCCGCTCCTTCTTCCTCTCCCGCCTCTTCCACCTCCAAGTCCGCGCCCACTTCGACTCCGAGGATGACTTCGTCGAGACCGTACGCGTCTTGCCCCGCGCGATTCATTTGAAAGCTGGGACGGATGCGCCGTTGAATGTGACTTTTATTAGGGCTCCGTCGAACGCTCTGTTGAAGGTTGACGTTCCTCTTGTGTTCAGAGGAGAAGATGTATCGCCTGGACTCAAGAAAGGTGCTTCTTTGAATACCATCAAAAGGACTGTCAAGTACTTATGCCCTGCTGACATTATTCCCCCATACATTGACGTTGATCTAAGTGAGTTGGATGTGGGCCAGAAGTTGGTCATGGGAGATCTCAAAGTTCATCCTGCTTTAAAACTTCTTCAGTCAAGAGATGAAGCTGTTGTTAAAATTATGGGCCAAAGAGTTTCTGAACTACAAAAGAAAAAGTAA 774 0.5556 MYLPRHHILTRLSPYRRHFSHSAAAVLRPPGPEPLTYLDGFPRPDPKHDETILAIPRADSGKNISTKERRAGRLPSIVFEQEDGQHGGNKRLISVRTDQIRKLVNHLGRSFFLSRLFHLQVRAHFDSEDDFVETVRVLPRAIHLKAGTDAPLNVTFIRAPSNALLKVDVPLVFRGEDVSPGLKKGASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSRDEAVVKIMGQRVSELQKKK* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0983 257 Gene3D Ribosomal Protein L25; Chain P 49 159 IPR020056 -
Gso19g0983 257 Pfam Ribosomal L25p family 54 156 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Gso19g0983 257 SUPERFAMILY Ribosomal protein L25-like 56 247 IPR011035 GO:0006412
Gso19g0983 257 Pfam Ribosomal protein TL5, C-terminal domain 165 247 IPR020057 -
Gso19g0983 257 CDD Ribosomal_L25_TL5_CTC 51 158 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Gso19g0983 257 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 19 256 - -
Gso19g0983 257 Gene3D Ribosomal protein L25, beta domain 162 254 IPR037121 -
Gso19g0983 257 PANTHER BNAA01G13300D PROTEIN 19 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0983 Gso-Chr19 37122638 37126010 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0983 K02897 - gmx:100809143 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0983 19 37122638 37126010 Gso16g0302 16 3452755 3456424 GST