Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0978 ATGAAGGTGGTGGCACTCGTTAGCGGCGGTAAAGACAGTTGCTATGCCATGATGAAGGCTATTCACTATGGCCATGAGATTGTTGCATTGGCCAATTTGATGCCGCTTGATGATTCCGTGGACGAGCTCGATAGCTACATGTACCAAACTGTTGGGCATCAAATTATTGTCAGATATGCTGAATGCATGGGATTGCCATTGTTCAGGAGGCGAATACAAGGATCCTCAAGGCATCAGGAGCTTGGTTACAAAGAAACTCAAGGTGATGAAGTTGAAGACCTGTGCATTTTGTTACGTGAAGTTAAAAGGCAGATACCCTCAGTTAGTGCAGTTTCTTCTGGAGCCATTGCATCTGACTATCAGAGATTGCGGGTGGAAAGTGTTTGTTCAAGGTTAGGCCTTGTTTCTCTGGCATACTTATGGAAACAAGATCAGTCATTGCTTCTCCAGGAAATGATTACAAATGGAATTGTAGCTGTAACTGTGAAGGTAGCTGCCATGGGTTTGGATCCTGCAAAGCACTTGGGTAAAGAATTAGCCTTCTTAAATGCTTATTTACATAAATTGAAAGAATTGTATGGAATCAATGTTTGTGGTGAAGGAGGGGAATATGAAACATTAACTCTTGATTGCCCGCTCTTTTCTAATGCTCGCATTGTGCTTGATGAATATCAAGTTGTGATGCACTCTTCAGATTCCATAGCTCCTGTCGGAATCCTTCATCCCCTGGCATTTCATTTGGAAAATAAGGCAGATGTTCAGTATTTAAAATCACAAGACAAAATACATGAGAGTTTTACACAGAAACTGGGATCTGTTTTTGAAGTGCAAGACAGTGTAGAAGGATGTGAGGCCACATGCAAGCCTGTAGATTATAGAGCTGACCCAATTAATGACATAGAACATAAATTTAACATCTCAAGAACAAATAACAAGGGCACATTCTCCATATGTTTCTGGTTGCAAGATTCATGCAATGCAGGTTTGCAGGAAGACTTGAAGATTGTTTTGGGGAAAATTGAATCACAGTTATTGGGCCTTGGTTTTGGCTGGGAGAATGTCCTTTATATTCACCTTTACATTGATGACATGAATAAGTTCTCTGAGGCAAATGAGACATATGTGAAGTTTATAACACAGGAGAAATGTCCATTTGGTGTTCCGTCTCGTAGTACTGTTGAAATGCCTCTTATAGAAATGGGTTTCAGCAGAGCATACATTGAAGTACTGGTAGCAAACAATAAAGATAAAAAGGTTTTGCATGTACAGAGTATTTCCTCTTGGGCACCTAGTTGCATTGGGCCATACAGCCAGGCAACCTTGCATGAGGGTATACTTCACATGGCTGGTCAATTGGGGCTTGATCCTCCAACAATGAATCTTTGCAAGGGAGGCCCTGGTGTTGAACTGGAACAAGCACTAAAAAACAGTGAAGCGGTGGCAAAATGCTTTAATTGTTCAATAACGACATCTGCAATTGCTTTTGTTATTTACTGTTCTAAACATATTTCATTATTGGAGAGACTTGATATTCAGGAGAAGCAAGAAACAATCCTTAGACAGATGAAGATCTCCCATTTACAGGAAAGAACCACTTACAAAGCATTAGATCCCTTGTTCCTTTATGTTCTTGTTCCTGATCTACCTAAAAGAGCATATGTAGAAGTAAAGCCTATTCTTTATGTCGAGGATGACACGGATGTAGCATTTGAGGTCGTAACAGAAAGATTTTGTTTGGAGACACCACCAAGTTATTGGGGTTTCAAGCCGGAAAATTGGCATGATTCTTGCACTCAGAAATGTGTGATTTCTGGAAAGATATGTGCCATTATACTGTCTATTACTAGTGAGCTGGCTGCCAAGATATGTTTTGATTCTCTGCCTGCTGAATATGTGAATAATGGTCAGCATTCTCTTCCAAAGGCACATATGGAGAAGATATCAAAGTTCTGCATTTACCTTCTTGACAAAGTTATGACAGACGATGACTTTGCTTGGGAAGATATAATGAGTTTGAGGTTCTACATCCCTGTAAGCCTTCAAATGTCAGTGCAGCTATTACAACCTATGTTCTGCAATGCTCTTTTTGAACTTTCGGAAATGAGTCAGAAGAAATTAAAAACTGGTGAGGAGCCAATCTTCAACATAGTTCCTGTCATAGGTTCTGGGAGGTCTGCTTCATCCATGGACGATGTAGTAACCTGTGAATTAATGGCTCAGAAATCCTGA 2229 0.4029 MKVVALVSGGKDSCYAMMKAIHYGHEIVALANLMPLDDSVDELDSYMYQTVGHQIIVRYAECMGLPLFRRRIQGSSRHQELGYKETQGDEVEDLCILLREVKRQIPSVSAVSSGAIASDYQRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGIVAVTVKVAAMGLDPAKHLGKELAFLNAYLHKLKELYGINVCGEGGEYETLTLDCPLFSNARIVLDEYQVVMHSSDSIAPVGILHPLAFHLENKADVQYLKSQDKIHESFTQKLGSVFEVQDSVEGCEATCKPVDYRADPINDIEHKFNISRTNNKGTFSICFWLQDSCNAGLQEDLKIVLGKIESQLLGLGFGWENVLYIHLYIDDMNKFSEANETYVKFITQEKCPFGVPSRSTVEMPLIEMGFSRAYIEVLVANNKDKKVLHVQSISSWAPSCIGPYSQATLHEGILHMAGQLGLDPPTMNLCKGGPGVELEQALKNSEAVAKCFNCSITTSAIAFVIYCSKHISLLERLDIQEKQETILRQMKISHLQERTTYKALDPLFLYVLVPDLPKRAYVEVKPILYVEDDTDVAFEVVTERFCLETPPSYWGFKPENWHDSCTQKCVISGKICAIILSITSELAAKICFDSLPAEYVNNGQHSLPKAHMEKISKFCIYLLDKVMTDDDFAWEDIMSLRFYIPVSLQMSVQLLQPMFCNALFELSEMSQKKLKTGEEPIFNIVPVIGSGRSASSMDDVVTCELMAQKS* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0978 742 Gene3D HUPs 1 157 IPR014729 -
Gso19g0978 742 SUPERFAMILY YjgF-like 418 565 IPR035959 -
Gso19g0978 742 Pfam Endoribonuclease L-PSP 429 496 IPR006175 -
Gso19g0978 742 Pfam Diphthamide synthase 1 230 IPR002761 -
Gso19g0978 742 PANTHER DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEIN 1 741 IPR030662 -
Gso19g0978 742 SUPERFAMILY YjgF-like 327 400 IPR035959 -
Gso19g0978 742 Gene3D - 307 411 IPR035959 -
Gso19g0978 742 Gene3D - 160 256 - -
Gso19g0978 742 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 241 - -
Gso19g0978 742 Gene3D - 412 562 IPR035959 -
Gso19g0978 742 TIGRFAM MJ0570_dom: MJ0570-related uncharacterized domain 1 231 IPR002761 -
Gso19g0978 742 CDD eu_AANH_C_2 436 560 - -
Gso19g0978 742 CDD Alpha_ANH_like_IV 2 214 IPR002761 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0978 K06927 - gmx:100807009 1479.92