Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso19g0967 | ATGGAAATTTCAAAGCATACTAATCGGTCTTATGAAGATTTTGATCCGCTGTTTATGTGGCGTAGAGAAGAGGGTCGTGACACCCTTGAACTTCACCTTCCAGGTTTTAGGAGAGACCAAATAAGAATTCAGATAAACCATGTGGGTTTATTGGTAATAAGCGGGGAGCGTCATTTTGAAGGAAACAGATGGAAACGTTTCAAGAAAGAATTCGAAATCCCATCATATTGCAATGACGATGCAATCCATGGCAACATGATGCAGAGCATTCTTTCGGTGGTGATGCCAAAGAAAAGTCCTCAAATTAGCCAAGAGGAGCAAGAACACAAGAAAGAGAGAAGGGCAAATAAAAAAGAAGACACCGAAGAAGCCTCAACCAAAGAGGGAATAGCTGAAGAAGATATAGGTCATGCAGAAGAGTATCACCAGTTTGAAGAAAATTATAATTATGTGAGACAGTTGCCACAGGAAACGACTAGAGAAGTTGCTCTCAAATTCATGCTTGTGATGGTTCTGATATTGGTCATAGCAAGTTACCTTGCAGATGTAAGCAAAAGCCTCATGGCTCAAGGTGCTTCATATTTTCACAATTAG | 594 | 0.4024 | MEISKHTNRSYEDFDPLFMWRREEGRDTLELHLPGFRRDQIRIQINHVGLLVISGERHFEGNRWKRFKKEFEIPSYCNDDAIHGNMMQSILSVVMPKKSPQISQEEQEHKKERRANKKEDTEEASTKEGIAEEDIGHAEEYHQFEENYNYVRQLPQETTREVALKFMLVMVLILVIASYLADVSKSLMAQGASYFHN* | 198 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso19g0967 | 197 | CDD | ACD_sHsps-like | 28 | 97 | - | - | |
| Gso19g0967 | 197 | ProSiteProfiles | Small heat shock protein (sHSP) domain profile. | 9 | 112 | IPR002068 | - | |
| Gso19g0967 | 197 | PANTHER | HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN | 1 | 195 | - | - | |
| Gso19g0967 | 197 | PANTHER | HEAT SHOCK PROTEIN 26 | 1 | 195 | IPR045045 | - | |
| Gso19g0967 | 197 | MobiDBLite | consensus disorder prediction | 97 | 136 | - | - | |
| Gso19g0967 | 197 | Coils | Coil | 102 | 122 | - | - | |
| Gso19g0967 | 197 | Gene3D | - | 1 | 105 | IPR008978 | - | |
| Gso19g0967 | 197 | SUPERFAMILY | HSP20-like chaperones | 10 | 100 | IPR008978 | - | |
| Gso19g0967 | 197 | MobiDBLite | consensus disorder prediction | 102 | 136 | - | - | |
| Gso19g0967 | 197 | Pfam | Hsp20/alpha crystallin family | 22 | 106 | IPR002068 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso19g0967 | Gso-Chr19 | 36875417 | 36876753 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso19g0967 | - | - | gmx:100801505 | 401.364 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso19g0967 | 19 | 36875417 | 36876753 | Gso16g0316 | 16 | 3587486 | 3588901 | GST |