Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0959 ATGGCGAGCGATTCGATTCAGCAGAGCGAAGCCCAAGTGGCGCTAATCCTGGGCCCGGACTCGGCCCACCTGGAATCCCTAATCTCCCAATTGATGTCTTCCTCCAACGACCAGCGCTCCCAGGCGGAGTCCCTCTTCAACCTCTGCAAGCAGGCCCGCCCTGAGGCCCTCTTATTGGGCCTGGCCCACCTCCTCCACTCCTCCCCGAACCCGGAGACCCGCACCATGTCCGCCATCCTCCTCCGCCGCCACCTCACGCGCCACCACGACTCCTTCCTCTGGCCTCTCCTCTCCCCCCCGGCCCGCTCCTCCCTCCACTCCCTCCTCCTCTCCTCCCTCCACAACGAGCCCCTCAAATCCATCACCAAGAAGCTCTGCGACACCGTCTCCGAGCTCGCCGCCGCCACCCTCCCCGACGACTCTGCCGCCTGGCCCGACCTCCTCCCCCTCCTCTTCCAGTGGGTCACCTCCCCCGACCCCAGGCTCCAAGAAATCTCGCTCCTTATTTTCGCCCAATTGGCTCATTACATCGGCCAAACCCTACTCCCTCAAATCTCCACTCTCCACTCCGTCTTCCTCCGCTCCCTTCACTCCTCCACCCCCTCCGACGTCCGCATCGCCGCCCTCGCCGCCGCCATCAACTTCATCCAATGCCTCACGAATTCCTCCGACAGAGACCGCTTCCAAGACCTCCTCCCTCTCATGATGCAGACCCTCACCGAGGCGCTGAACTCCGGCCAGGAGGCCGTCGCTCAGGAGGCGCTTGAGCTTCTCATCGAGCTCGCTGGCACCGAGCCGCGCTTCCTCCGGCGACAAATTGTCGACGTCGTGGGGTCCATGTTACAGGTCGCAGAAGCTGAGACTTTGGAGGAAGGAACACGGCACTTGGCGATTGAGTTTGTGGTTACTCTCGCCGAGGCAAGGGAGCGTGCTCCCGGCATGATGAGGAAGTTTCCACAGTTTGTGAGGAAGCTTTTTGGTGTGTTGATGAATTTGGTGCTTGATATCGAGGATGATCCTGCGTGGCACGGTGCAGTGGATGAGGATGAGGATGAGGACGCCGGCGAGACGAGTAACTATGGCTTTGGACAGGAGTGTCTGGATAGGCTTTCGATTTCGCTCGGTGGGAACACCATTGTGCCGGTTGCCTCTGAGTTGCTGCCCACCTACTTGGCTGCTCCTGAGTGGGAAAAGCACCATGCTGCGCTCATTGCTCTTGCGCAAATCGCCGAGGGTTGTTCCAAGGTTATGATAAAGAATCTGGAGCAGGTATTGTCAATGATTTTGAATTCATTTCGTGATCCTCACCCTCGAGTGCGATGGGCAGCTATAAATGCAATTGGGCAGTTGTCCACGGATTTGGGGCCAGACTTGCAGGTTAAATTTCACCACTTAGTGCTTCCGGCTTTGGCTGGAGCCATGGATGATTTTCAAAATCCAAGAGTACAGGCTCATGCTGCTTCTGCAGTGCTAAATTTCACTGAGAATTGTACCCCAGATATCCTAACACCTTACTTAGATGGGATTGTGAGCAAACTTTTGGTACTCCTGCAGAATGGGAAGCAAATGGTTCAAGAAGGGGCTTTGACAGCCTTAGCATCTGTTGCAGATTCTTCAGAGGTGCAATTTCAGAAGTATTATGATGCTGTGATGCCATACTTAAAAGCTATTTTGGTGAACGCAAATGATAAATCTAATCGTATGCTTCGAGCCAAAGCAATGGAGTGCATTAGTTTGGTAGGAATGGCTGTTGGAAAGGAGAAGTTCAGGGATGATGCCAAACAGGTCATGGATGTCTTGATGTCACTGCAACAATCTCAACTGGATGCTGATGATCCAACTGCAAGTTACATGTTACAAGCATGGGCACGGCTTTGCAAGTGCCTTGGGCAGGATTTTCTCCCATATATGGGTTTTGTGATGCCTCCTTTGCTCCAGTCTGCACAACTTAAGCCCGATGTGACCATTACATCAGCGGATTCTGATACTGAATTTGATGAAGATGATGACAGCATTGAAACAATTACACTTGGGGATAAAAGGATAGGCATTAAGACTAGTGTGTTGGAGGAGAAGGCCACTGCTTGTAACATGCTATGTTGCTATGCTGATGAGTTGAAGGAAGGATTTTTTCCTTGGATTGACCAGGTTGCTTTCACATTGGTTCCTCTTCTTAAATTTTACTTCCATGAAGAAGTTAGGAAGGCAGCAGTTTCAGCCATGCCGGAACTGTTGTCCTCGGCAAAATCAGCTGTAGTGAAGGGACAATCACAAGGTCGTGATGAGACTTATGTGAAACAGCTTTCTGATTATATAATACCAAATTTGGTGGAGGCTTTACACAAGGAGCCAGAAGTAGAAATTTGTGCAAGCATGTTGGATGCATTGAATGAATGCATACAGGTCTCTGGATCACATCTAGATGAAAAGCAAGTTCGGAGCATTGTTGATGAGATTAAACAAGTCCTTACGGCCAGTTCATCAAGAAAACATGAAAGAGCAGAGAGGGCCAAAGAAGAGGACTTTGATGCTGAAGAAAGAGAACTACTCAATGAAGAAAATGAGCAAGAAGAGGAGCTTTTTGATCAAGTTGGTGATTGCTTGGGAACTTTGATAAAAACATTCAGGACATCTTTCTTGCCTTTCTTTGATGAGCTGTCCTCATACCTAACACCTTTGTTTGGTAAAGACAAAACCTCAGAGGAAAGGAGAATTGCCATTTGTATATTTGATGATGTTGCTGAGCACGGTCGTGAAGCCGCTCTTAAATATTATGATTCTTTTCTTCCATTCTTACTCGAAGCTTGCAATGATGAATATCCCGATGTTCGACAGGCTGCTGTTTATGGTGTTGGTGTTTGTGCTGAGTTTGGTGGATCTGTTTTCAGCCCCCTTGTTGGAGAGGCACTTTCAAGGTTAGATGCTGTGATAAGGCATCCAAATGCACTACATGCTGATAACATAATGGCATATGACAATGCCGTCTCAGCTCTTGGAAAAATATGCCAATTCCATCGTGATAGCATAAATGCAGCACAGGTTGTTCCTGCCTGGCTAAGTTGCTTGCCTATAAAAGGTGATTTAATTGAAGCTAAGGTTGTGCATGACCAACTTTGTTCAATGGTTGAAAGATCTGATAGAGAACTTATAGGTCCCAACAATCAATATCTTTCCAAAATTGTTGCAGTTTTTGCCGAGATTTTATGTGCGGGAAATGATCTGGCAACCGAACAGACTGTTAGTAGGATGATTAATTTATTGAGGCAGCTTCAACAGACTTTACCACCTTCTACCCTTGCTTCAACCTGGTCATCCTTGCAGCCTCAGCAGCAGCTTGCACTTCAGTCCATCCTATCATCCTAG 3363 0.4918 MASDSIQQSEAQVALILGPDSAHLESLISQLMSSSNDQRSQAESLFNLCKQARPEALLLGLAHLLHSSPNPETRTMSAILLRRHLTRHHDSFLWPLLSPPARSSLHSLLLSSLHNEPLKSITKKLCDTVSELAAATLPDDSAAWPDLLPLLFQWVTSPDPRLQEISLLIFAQLAHYIGQTLLPQISTLHSVFLRSLHSSTPSDVRIAALAAAINFIQCLTNSSDRDRFQDLLPLMMQTLTEALNSGQEAVAQEALELLIELAGTEPRFLRRQIVDVVGSMLQVAEAETLEEGTRHLAIEFVVTLAEARERAPGMMRKFPQFVRKLFGVLMNLVLDIEDDPAWHGAVDEDEDEDAGETSNYGFGQECLDRLSISLGGNTIVPVASELLPTYLAAPEWEKHHAALIALAQIAEGCSKVMIKNLEQVLSMILNSFRDPHPRVRWAAINAIGQLSTDLGPDLQVKFHHLVLPALAGAMDDFQNPRVQAHAASAVLNFTENCTPDILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSEVQFQKYYDAVMPYLKAILVNANDKSNRMLRAKAMECISLVGMAVGKEKFRDDAKQVMDVLMSLQQSQLDADDPTASYMLQAWARLCKCLGQDFLPYMGFVMPPLLQSAQLKPDVTITSADSDTEFDEDDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAFTLVPLLKFYFHEEVRKAAVSAMPELLSSAKSAVVKGQSQGRDETYVKQLSDYIIPNLVEALHKEPEVEICASMLDALNECIQVSGSHLDEKQVRSIVDEIKQVLTASSSRKHERAERAKEEDFDAEERELLNEENEQEEELFDQVGDCLGTLIKTFRTSFLPFFDELSSYLTPLFGKDKTSEERRIAICIFDDVAEHGREAALKYYDSFLPFLLEACNDEYPDVRQAAVYGVGVCAEFGGSVFSPLVGEALSRLDAVIRHPNALHADNIMAYDNAVSALGKICQFHRDSINAAQVVPAWLSCLPIKGDLIEAKVVHDQLCSMVERSDRELIGPNNQYLSKIVAVFAEILCAGNDLATEQTVSRMINLLRQLQQTLPPSTLASTWSSLQPQQQLALQSILSS* 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0959 1120 PANTHER BNAC09G37860D PROTEIN 14 1119 - -
Gso19g0959 1120 Pfam HEAT repeat 928 956 IPR000357 GO:0005515
Gso19g0959 1120 Pfam Importin repeat 6 789 891 IPR041389 -
Gso19g0959 1120 ProSiteProfiles HEAT repeat profile. 424 462 IPR021133 -
Gso19g0959 1120 Pfam Importin repeat 288 381 IPR041653 -
Gso19g0959 1120 SUPERFAMILY ARM repeat 23 959 IPR016024 -
Gso19g0959 1120 Gene3D - 20 1119 IPR011989 -
Gso19g0959 1120 Coils Coil 835 859 - -
Gso19g0959 1120 PANTHER IMPORTIN BETA 14 1119 IPR040122 GO:0006606
Gso19g0959 1120 Pfam HEAT repeats 390 489 - -
Gso19g0959 1120 SMART TOG_3 373 614 IPR034085 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0959 Gso-Chr19 36729241 36739698 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0959 K20222 - gmx:100797431 2040.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0959 19 36729241 36739698 Gso16g0326 16 3689574 3699437 GST