Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0956 ATGGCCACTTCTCTTCTTTTCTTCATCGCTTGTCTCTCTCTTCTACCATCCTCTTATTGCTCTCCTTTTCCACCTTCTGCTTCCTTTCTCTATGAGCTTCAATCTCAGTGCTCCCTTGCCGTCTCCCCTGACCCTCCTCTTCGGGTGGATGGGAATTTCATAGAAGGGGTTTTGTCTGGCAGAAAGAGGGTTGGATACATTTCTATACTCTTCTATGCTTCCTGGTGTCGTTTTTCACGCAGAATGCTTCCTGAATTTGAGATTCTTAGTTCCATGTTTCCTCAAGTACAACATGTAGCACTTGAGCAATCTTCTGCTTTGCCCAGCTTATATTCAAAATATGGAATCCATAGCTTACCTGCAATCTTACTGGTGAACCAGACATCTAGGGTGAGATATCATGGTCCAAAAAATCTCAACTCCCTTGTAGAATTTTATGAGAGAAACACAGGATTAGAAGCCAAGGACAATGCTGTTGTTGGTCAACCGAGCAACTTTTTGAGTGATGAACATTCAACTATGAAGGGCTTCTCCCTCAAAGAAATATTTAACAGGGAACCTTACTTGGCATTATCTATATTGTTTCTCTGTTTAAGGATTATTCTCTTTGTATTTCCCACGATTATGCCACGCCTCAAAGCATTCTGGACTTCCTATGCTTCTCATTTGAACTTGCAAATATTTGGCCAAGTGATGGAACGTGTTCTTAATGTAATTGATGTCAAGAGGATTTGGACCAAGCTAAGACTATGCAAGACCAGGAACTTTCATGAAAGGGTGAGGAGCGCCCGGGTTTGGGCATCATCACTTGCTTCTGTTTCTCTTGGTGGCTCATCAGCTAGGTGA 846 0.4243 MATSLLFFIACLSLLPSSYCSPFPPSASFLYELQSQCSLAVSPDPPLRVDGNFIEGVLSGRKRVGYISILFYASWCRFSRRMLPEFEILSSMFPQVQHVALEQSSALPSLYSKYGIHSLPAILLVNQTSRVRYHGPKNLNSLVEFYERNTGLEAKDNAVVGQPSNFLSDEHSTMKGFSLKEIFNREPYLALSILFLCLRIILFVFPTIMPRLKAFWTSYASHLNLQIFGQVMERVLNVIDVKRIWTKLRLCKTRNFHERVRSARVWASSLASVSLGGSSAR* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0956 281 ProSiteProfiles Thioredoxin domain profile. 38 151 IPR013766 -
Gso19g0956 281 Pfam Thioredoxin 67 146 IPR013766 -
Gso19g0956 281 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 7 4 280 - -
Gso19g0956 281 Gene3D Glutaredoxin 48 161 - -
Gso19g0956 281 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 7 4 280 IPR044794 -
Gso19g0956 281 SUPERFAMILY Thioredoxin-like 30 149 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0956 Gso-Chr19 36698459 36703862 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0956 - - gmx:100795848 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0956 19 36698459 36703862 Gso16g0329 16 3720304 3725819 GST
Gso19g0956 19 36698459 36703862 Gso2g0601 2 6265656 6268952 PCT
Gso2g0601 2 6265656 6268952 Gso19g0956 19 36698459 36703862 PCT