Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0952 ATGAAGAGCATGGTGACGCCATTGACGAGGGTCTTACCCTTTCGTCACCCAAATGGCCATAATACCCTTCCATTTTCTCTTACACGCTACCCTTCTTCACCAAACTTCTCCTTCTCCCCTCTCACTCTCACTCTTTCCATGGCTGCTTCACCCCAATCCTCCGCTCCAACTGTGTCGCCTGGTGATGTTAACATCGACAAAGATGGTGTATTTCAATTGATTCAAGCTCATCAGGAAAAAGCTGCTAGACTTCCACCAGTTGAGGAGATTCGAACTGTCCTTGATCGTAGCGTGCGCGGGATGCTCTCTACATTCTCAAAGAAGTTTGATGGTTATCCATCAGGGTCTATGGTTGACTTTGCATGTGATTCAAATGGATATCCTATATTAGCAGTGAGCGACTTGGCAGTTCATTCAAAGGACCTAACTGCCAATCCTAAATGTTCATTGCTTGTGGCTAGAGATCCTGAAGATAGGACTGATTTAGTGATTACTGTACATGGTGATGCTATCTCTGTTCCTGAAAATGAAAGAGAAGCCGTTCGAGCTGCATATTTGGCGAGGCATCCCAATGCATTTTGGGTTGACTTTGGAGACTTCCAATTCTTGCGCATTGAACCGAAAGTTGTACGATTTGTGTCAGGTGTTGCCACAGCTTTGTTAGGATCAGGAGAGTTTAGTGGAGATGAGTATAAATCTGCAAAAGTTGATCCCATAGCTCAGTTTTCCAAGCCAGTGGCGTCTCATATGAACAAAGATCATGCTGAAGATAACAAAGTGATTGTGCAGCATTGGACCTCAGTTCCAGTGGACTTTGCCTTCATACTAGATTTGGATAGTCTTGGTTTCAATGTTAAGGCTGGTTATCAGGGTGATACTTTCAAGCTTCGTGTACCTTTCCCTCGATGTGCAGAAGATAGAAAGGATGTGAAGACTCTCATTGTTGAGATGCTTCAAGCTGCTAGGCCTAAAGTTGATTGA 981 0.4414 MKSMVTPLTRVLPFRHPNGHNTLPFSLTRYPSSPNFSFSPLTLTLSMAASPQSSAPTVSPGDVNIDKDGVFQLIQAHQEKAARLPPVEEIRTVLDRSVRGMLSTFSKKFDGYPSGSMVDFACDSNGYPILAVSDLAVHSKDLTANPKCSLLVARDPEDRTDLVITVHGDAISVPENEREAVRAAYLARHPNAFWVDFGDFQFLRIEPKVVRFVSGVATALLGSGEFSGDEYKSAKVDPIAQFSKPVASHMNKDHAEDNKVIVQHWTSVPVDFAFILDLDSLGFNVKAGYQGDTFKLRVPFPRCAEDRKDVKTLIVEMLQAARPKVD* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0952 326 Pfam Pyridoxamine 5'-phosphate oxidase 91 214 - -
Gso19g0952 326 PANTHER OS07G0573800 PROTEIN 44 323 - -
Gso19g0952 326 SUPERFAMILY FMN-binding split barrel 88 322 - -
Gso19g0952 326 Gene3D - 236 325 IPR037119 -
Gso19g0952 326 Gene3D - 64 221 IPR012349 -
Gso19g0952 326 Pfam Domain of unknown function (DUF2470) 244 317 IPR019595 -
Gso19g0952 326 PANTHER CREG1 PROTEIN 44 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0952 Gso-Chr19 36639379 36645047 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0952 - - gmx:100793739 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0952 19 36639379 36645047 Gso16g0332 16 3773328 3778945 GST