Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0950 ATGGAATCGCACCTTCTAGTGGGACCCATCTCCGCCGCACGCTATGGTTGCGCCGCCAATTCCAGCCACTTTCACTCCGCCGCATCCTCCACCTGGGCCAACTCTCCTCGCCGGCGGTCTCCACTCGTCATGGCCTCCTCGTCGTCTGCCGCCGTCAACGGCGGCCAGAACTACTACGCCGTTCTCGGTGTCGCCCGCACTGCCACCACCGTCCAAATCAAACGCGCTTATCGCCTCCTCGCCCGCAAGTATCATCCTGATGTTAGCAAGGATCCACACGCTGCTGAATTATTCAAGAGCATCCATCATGCATATGAAGTCCTATCTAATGAAGCAACGAGAGTTCAGTATGATCAAGAACTTCAATTTGGTCACAAGCCTTACAGGGAAAAATGGAGTTACAGCACTGAATTTGAAGATCAGGCAAGATTCTATAGGTGGGACCGCATGAGGAAAAAAATGGATAGGGAAAGATACTGGGAGAATTACAATGTCAATGAGGACTACTACACCAGTGAAACAGATGAGGAAGAAGATGAAGTAGTAGATTTAGATGAAGAGAGGGGTTCTTTTGTTGAAGTGCTTAGATCAGCATTCATGTCATTATTTTTGCTTCAGACGCTTGGATCCCGTTTCTCACTCACATTCAGCAGTCTGATGGCATTGTTTGATAAGAAATTAGACACCGGCTATAAAATGGGCTATGTAATAGCATGGATTTTGGGTGGGAGGGGTGGCATATTGCTAACACTATGCTTGTCATTTGCAAGTTGGGTTTGCGGGAAAACCAGTAGTAGTGTTGTCGCACTAGTTGTGGTGGCCTTGTGGGTTGGCTCATACCTTGCAAGGTATGCACCACTTCCCCAAGGTGCTCTATTAGCTCTTCTCTACATGTCCATTAAGCTACAGTCTGACCTAATATAA 924 0.4794 MESHLLVGPISAARYGCAANSSHFHSAASSTWANSPRRRSPLVMASSSSAAVNGGQNYYAVLGVARTATTVQIKRAYRLLARKYHPDVSKDPHAAELFKSIHHAYEVLSNEATRVQYDQELQFGHKPYREKWSYSTEFEDQARFYRWDRMRKKMDRERYWENYNVNEDYYTSETDEEEDEVVDLDEERGSFVEVLRSAFMSLFLLQTLGSRFSLTFSSLMALFDKKLDTGYKMGYVIAWILGGRGGILLTLCLSFASWVCGKTSSSVVALVVVALWVGSYLARYAPLPQGALLALLYMSIKLQSDLI* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0950 307 SUPERFAMILY Chaperone J-domain 56 129 IPR036869 -
Gso19g0950 307 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 23 293 - -
Gso19g0950 307 Gene3D DnaJ domain 55 164 IPR036869 -
Gso19g0950 307 ProSitePatterns Nt-dnaJ domain signature. 98 117 IPR018253 -
Gso19g0950 307 CDD DnaJ 57 110 IPR001623 -
Gso19g0950 307 Pfam DnaJ domain 57 118 IPR001623 -
Gso19g0950 307 ProSiteProfiles dnaJ domain profile. 57 121 IPR001623 -
Gso19g0950 307 SMART dnaj_3 56 113 IPR001623 -
Gso19g0950 307 PRINTS DnaJ domain signature 59 77 IPR001623 -
Gso19g0950 307 PRINTS DnaJ domain signature 77 92 IPR001623 -
Gso19g0950 307 PRINTS DnaJ domain signature 93 113 IPR001623 -
Gso19g0950 307 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 23 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0950 Gso-Chr19 36590538 36594322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0950 36 122 Miscellaneous Gene Families AT5G49580 33.000 2.27e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0950 - - gmx:100791619 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0950 19 36590538 36594322 Gso13g0149 13 9997804 10029177 GST
Gso19g0950 19 36590538 36594322 Gso16g0334 16 3800087 3804773 GST