Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0914 ATGAAGAACAGAACATCAGGGTTTCTGAAGGAGATCATAGCAAATCTGAGCTCAATGGCCAAGTCAAAAACCATGGCCTTGAAGTCCAAAACAAACGCCATAAGGGCACGTTTGATCATATTCTCACTTATGAAGAACAAGAAATTCTTGATGAGTTCCCTCTCTGAGAAGTTCCATTCTGTGTGGGGGCAAAGTTCATCTCAACAAAAGGAAGATCATTGCTTATTGGAAGATGGCAGCAATGATCACCAAAGCAAGGCCATAGTGTTGTACAACAGCAATGCACACTCCTATGAGGCCCTGCCTAACCCCAGTGAAACCCAATTGGTGGTGGAGGAGGAACAAGACCAAGATGGATATGATGGTTACTACAATTATCATTGTGATGATGATGAGAAGTACCCTGATCTCACACACACCCTTTTTGAGTCTGAGGATTTGGATCTTGGAGGGTCAGTGATTGATTTGATGAAGAATTCTAAGGAGGAGGCAGGGAAAGAGTTTAAGCTGGAGGATGAGATTGACCTTGCTGCTGATCTTTTCATCATGAAGTTTCGAAGGCAAATGGTGCTGCAGAAGCAAGAATCATTGAAGAGGAAGAGGGAAGTGCTGGAAAATGGTGCATGA 627 0.4338 MKNRTSGFLKEIIANLSSMAKSKTMALKSKTNAIRARLIIFSLMKNKKFLMSSLSEKFHSVWGQSSSQQKEDHCLLEDGSNDHQSKAIVLYNSNAHSYEALPNPSETQLVVEEEQDQDGYDGYYNYHCDDDEKYPDLTHTLFESEDLDLGGSVIDLMKNSKEEAGKEFKLEDEIDLAADLFIMKFRRQMVLQKQESLKRKREVLENGA* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0914 208 Pfam Cotton fibre expressed protein 171 203 IPR008480 -
Gso19g0914 208 PANTHER EMB|CAB67623.1-RELATED 1 206 - -
Gso19g0914 208 PANTHER COTTON FIBER PROTEIN 1 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0914 Gso-Chr19 35764287 35765763 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0914 - - gmx:100807332 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0373 16 4243034 4244413 Gso19g0914 19 35764287 35765763 PCT
Gso19g0914 19 35764287 35765763 Gso16g0373 16 4243034 4244413 PCT