Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0899 ATGCTGGAATGCGTTTCTTTCAAATCGTCGACTCCTACCACCAACTCTTCTCCACTTCCTCCCCCTTCCCACTCTCATTCCGAAGGGAACTCGGCGGAGGAATTCGAAGAAGACACTTCTGCCACAAGCCCAAACGTCTCGGGCGAGTTCCACCGCGCTTTGGAGGCCCACTCCTACAACGAGATCCGGTCCATGGTCCAGGCCCCACCGCAGGTCCACCACATCGACGACGAGGACTCGCACCACCGCCACGTCCTCTCCCAGGTCCTCCAACCCGACTCTCACAGCGTCCACGAAGCCCTCGCGAAAGCAAAACCTAAGAGCAACCTCACGCGCCTCGTCTCCACCTACTTCTACCACAGCGAAACCGCCTCCGACTTCTGCCTCCGCCTCAGCCGCAGCGTCCACCGCGCCCGCCACCTCTACGCGCCGCTCTCTGACCTCCTCGCCGTCCTCCCCGCCTCCGCACCGCCGCTCTCCCAACCGCAATGCGACCGCGCCTACGAGCTCTTCCTCCAATTTGACCGCGAAGAGAATCCTTTCGCGCTCTCCCGCCTCCACCGCCTCCGCGACGACTTCTCCGACCTCAAGCGCGACATCCAGCGCGACCTCCGCAAGTGCCACTCGCGAATCCGCCTCTTCCGCCACAGCGCCGCGGGCTGCGCCCTCTGCTTCGTTGCCGTCGCTGCCGGCACCGTTGTCGTTGCCTCCATCGTCTTCGTACATGCTCTAGTAGGGTTCAGCGCCCTCTCCGCGGCGCCGTTTTGTGTTACGCGGCAGAAGAGGAGGGAGCTTGCGAGGCTGAAGCAGCTTGAGGCTGTGGAGAATGGGACTCTTGTGGTGAATGACATTAACACCATTGATAGCCTCGTTGATCGGCTTCAAACCGCAGTAGAAGGGGATAAGGCTTTTGTTAGGTTTGCATTGGATAGGGGAAGGGAGAGACATCCCATTCAGGAAGTGCTTAACCAGCTTAGAAAGAACCAACCTGTTTTGGAGCATTTGCTTGGGGATCTTGAGCAACATATATACTTCTGCTTTTATAGTGTTAACATGGCCAGATATGCACTCCTCAAAGCGATATGCAGTCATCAAACTCCCTAG 1104 0.5842 MLECVSFKSSTPTTNSSPLPPPSHSHSEGNSAEEFEEDTSATSPNVSGEFHRALEAHSYNEIRSMVQAPPQVHHIDDEDSHHRHVLSQVLQPDSHSVHEALAKAKPKSNLTRLVSTYFYHSETASDFCLRLSRSVHRARHLYAPLSDLLAVLPASAPPLSQPQCDRAYELFLQFDREENPFALSRLHRLRDDFSDLKRDIQRDLRKCHSRIRLFRHSAAGCALCFVAVAAGTVVVASIVFVHALVGFSALSAAPFCVTRQKRRELARLKQLEAVENGTLVVNDINTIDSLVDRLQTAVEGDKAFVRFALDRGRERHPIQEVLNQLRKNQPVLEHLLGDLEQHIYFCFYSVNMARYALLKAICSHQTP* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0899 367 PANTHER OS04G0405700 PROTEIN 22 365 - -
Gso19g0899 367 Pfam Protein of unknown function (DUF677) 189 361 IPR007749 -
Gso19g0899 367 MobiDBLite consensus disorder prediction 1 28 - -
Gso19g0899 367 MobiDBLite consensus disorder prediction 1 47 - -
Gso19g0899 367 PANTHER UPF0496 PROTEIN 3-RELATED 22 365 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0899 Gso-Chr19 35398493 35400666 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0899 - - gmx:102665502 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0899 19 35398493 35400666 Gso17g1661 17 30625496 30629250 GST
Gso16g1190 16 31130481 31132623 Gso19g0899 19 35398493 35400666 GST
Gso19g0899 19 35398493 35400666 Gso16g1190 16 31130481 31132623 PCT
Gso19g0899 19 35398493 35400666 Gso19g0899 19 35398493 35400666 PCT
Gso17g1661 17 30625496 30629250 Gso19g0899 19 35398493 35400666 PCT
Gso16g1190 16 31130481 31132623 Gso19g0899 19 35398493 35400666 PCT
Gso19g0899 19 35398493 35400666 Gso17g1661 17 30625496 30629250 PCT