Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0841 ATGGGAAGCACATTTAATCCACAGATTTTGGTGGAAAAACTAGCCAAGCTGAATGTTTCACAAACAAGCATAGAGACCCTGTCACACTGGTGTATTTTTCATATGAACAAAGCCAAACAAGTTGTTGAAACATGGGATAGACAATTTCATAGTTCTTCACGTGAGAAGAGATTGGCATTTCTGTATCTTGCAAATGATATTTTACAGAACAGCAGGCGAAAGGGTTCTGAATTTGTTGGTGAATTCTGGAAGGTTCTTCCAGAAGCTCTTCGAGATGTGATTCAAAATGGAGATGATTTTGCGAGGAATGCAGCACTTCGGCTGATTGGTATATGGGAAGAGAGGAAAGTTTTTGGTTCTCGCGGTCAAATTCTTAAGGAAGAGTTTGTTGGGAGTCATGTGGAAAATAATAGCCGAGATGTGAAACCTACAAACATGAAACTGAGGCCATCTGTGGGGAATGCATTGGAGAAAATAGCTTCAGGTTTTCATGTTGTTTATGGAGGGCAAACAGATGAAGATGCCGTATTGAGCAAGTGCAGGAATGCCATTAACTGTCTTGATAAAGCAGAAAAGGAAATAGTTTCAGGGCAATTCGGTGGATCTGCACTAGTGGATGAGCTCCAGGGGCATAATGCCATACTGAAGGACTGCATCGAGCAATTAACAGCCATAGAGTCATCTAGAACTAGTCTTGTGTCACTCTTGAGAGAAGCTCTCGAGGATCAGGAATTCAAGCTGGGTCAAGTCCGTAGCCAGATTCAGGCTGCACATGTTCAGTCAGAACGGGCGACCAACACCTGCCAGCAATTACTGAATGTCAACAACATTCCATCATTAGCTGAGCAGAGCTCAAAGGAAATTCAAACCTCCATGACTCCTGCAAGTTTTAATATTTCTAGTGAAAGGGAGCAATCGGCTCCATTAATGTACACACCACAAGTGTCATTTTCTCAAAAATCTGGACACATTGAGGAAGATCCACGCAAGTCTGCAGCTGCTGCAGTGGCAGCAAAACTGACTGCTTCAACATCCTCTGCGCAGATGCTATCTTATGTGTTGTCATCCCTAGCATCAGAAGGTGTGATAGGAAATCCAATGAAAGAATCTTCAGCAGATTATCACTCTGAGAAGAGGACCAAGCTTGAGAATGACCAGCCATCTTTTGTACCATCTCAGAATCCTCAACAACCACTTCCTCCCTTTCCACTTTCTGAGTCTATTCAACACAATCCACCGACAACCAACCAACAATCTACTCCCAACGAACCACCACCTCCACCTTCTTCATCACCTCCCCCATTGCCGCCACCACCACCACCACCAATGTCACAGTACCCTGTGCCGCAGTTCATGCAGACTGCCGGATCCATTAGTAGTATGGCATACAGCTATGGCGTGACACAACAGCCATCAATTGCAGCCTATCCAGGTGTTGGGCCTTCCCTGAATAGTGTTTCTACTTTTACCCCGCCTCCAATGGGTACATATCAGGGTTTTCAGGGTTCAGATGGAAATTACTATAACCAGCCCTCATCAATGCCTATGGCCCCAATATCTCGACAATAA 1569 0.4449 MGSTFNPQILVEKLAKLNVSQTSIETLSHWCIFHMNKAKQVVETWDRQFHSSSREKRLAFLYLANDILQNSRRKGSEFVGEFWKVLPEALRDVIQNGDDFARNAALRLIGIWEERKVFGSRGQILKEEFVGSHVENNSRDVKPTNMKLRPSVGNALEKIASGFHVVYGGQTDEDAVLSKCRNAINCLDKAEKEIVSGQFGGSALVDELQGHNAILKDCIEQLTAIESSRTSLVSLLREALEDQEFKLGQVRSQIQAAHVQSERATNTCQQLLNVNNIPSLAEQSSKEIQTSMTPASFNISSEREQSAPLMYTPQVSFSQKSGHIEEDPRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGNPMKESSADYHSEKRTKLENDQPSFVPSQNPQQPLPPFPLSESIQHNPPTTNQQSTPNEPPPPPSSSPPPLPPPPPPPMSQYPVPQFMQTAGSISSMAYSYGVTQQPSIAAYPGVGPSLNSVSTFTPPPMGTYQGFQGSDGNYYNQPSSMPMAPISRQ* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0841 522 Pfam CID domain 9 120 IPR006569 -
Gso19g0841 522 SUPERFAMILY ENTH/VHS domain 13 117 IPR008942 -
Gso19g0841 522 SMART 558neu5 9 130 IPR006569 -
Gso19g0841 522 Gene3D - 2 129 IPR008942 -
Gso19g0841 522 ProSiteProfiles CID domain profile. 2 134 IPR006569 -
Gso19g0841 522 Coils Coil 521 522 - -
Gso19g0841 522 MobiDBLite consensus disorder prediction 418 447 - -
Gso19g0841 522 MobiDBLite consensus disorder prediction 472 522 - -
Gso19g0841 522 CDD CID_RPRD_like 7 128 - -
Gso19g0841 522 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 522 - -
Gso19g0841 522 MobiDBLite consensus disorder prediction 481 522 - -
Gso19g0841 522 MobiDBLite consensus disorder prediction 393 407 - -
Gso19g0841 522 MobiDBLite consensus disorder prediction 363 452 - -
Gso19g0841 522 PANTHER OS01G0925000 PROTEIN 1 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0841 Gso-Chr19 34076641 34091423 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0841 K15559 - gmx:100806108 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0841 19 34076641 34091423 Gso16g0432 16 5020058 5035346 GST