Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0636 ATGGCTTCAGATGCTGACATGGAGGACTATGGCTTCGAGTACTCTGATGAGGAGCAAGAAGAGCAAGACGTTGATATCGAGAATCAATATTACAATTCAAAAGGTATGGTTGAAAGTGATCCCGAAGGTGCGCTTGCTGGTTTTGCTCAGGTAGTGCAAATGGAACAAGAAAAAGCAGAATGGGGATTTAAAGCTCTAAAACAGACTGTCAAGCTACATTATCGACTGGGAAGGCATAAAGAGATGATGAAAGCCTATAGGGAGATGCTGACATATATTAAGTCAGCAGTGACTCGTAACTATAGTGAAAAATGCATAAACAGCATTATGGACTATGTCTCGGGTTCAGCAAGCCAGAACTTTGGCCTTCTCCAGGAATTCTACCAGACTACTCTGAGGTCACTTGAAGAAGCAAAGAATGAGAGATTGTGGTTTAAGACAAATCTGAAGCTTTGCAAGATATATTTTGATATTGGTGAATATGGGCGCATGAGTAAGATCTTGAAGGAACTTCACAAATCCTGTCAAAAAGAAGATGGCACAGATGACCATAAGAAAGGAACCCAACTTTTGGAGGTATATGCTGTAGAGATTCAAATGTACACTGAGACCAAGAACAACAAAAAACTTAAGCAACTTTACCAGAAAGCACTCACTATTAAGTCAGCAATTCCCCATCCAAGGATAATGGGAATAATCCATGAATGTGGCGGGAAAATGCATATGGCTGAGCGCCAGTGGGCAGATGCAGCTACTGATTTCTTTGATGCTTTCAAGAATTATGATGAAGCTGGTAGTCAGAGACGTATCCAATGTTTGAAATACCTTGTTCTTGCCAACATGTTGATGGAGTCTGAAGTAAATCCATTTGATGGACAGGAAGCTAAGCCATACAAGAATGACCCCGAAATTTTGGTAATGACAAACTTAATAGCAGCTTATCAACGGAATGAAATATCGGAATTCGAGAAAATCCTGAAGAGTAACAGAAGAACCATCATGGATGATCCATTTATCAGAAATTACATTGAGGATCTGCTAAAGAATATTAGAACCCAAGTCTTGCTGAAGCTTATCAAACCATATACAAGGATCAGGATCCCTTTTATATCTAAAGAACTTAATGTTCCTGAGCATGATGTTGAGCAGCTATTGGTGTCACTGATTTTGGATAATAGAATCCAAGGGCATATTGATCAAGTGAACCGGTTCTTAGAACGCTCTGATAGGTCGAAAGGAATGAAGAAGTACACTGCAGTTGACAAATGGAACACGCAGCTTAAATCTCTTTATCAAACTATTAACAACAGAGTTTCTTAA 1320 0.3939 MASDADMEDYGFEYSDEEQEEQDVDIENQYYNSKGMVESDPEGALAGFAQVVQMEQEKAEWGFKALKQTVKLHYRLGRHKEMMKAYREMLTYIKSAVTRNYSEKCINSIMDYVSGSASQNFGLLQEFYQTTLRSLEEAKNERLWFKTNLKLCKIYFDIGEYGRMSKILKELHKSCQKEDGTDDHKKGTQLLEVYAVEIQMYTETKNNKKLKQLYQKALTIKSAIPHPRIMGIIHECGGKMHMAERQWADAATDFFDAFKNYDEAGSQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILVMTNLIAAYQRNEISEFEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISKELNVPEHDVEQLLVSLILDNRIQGHIDQVNRFLERSDRSKGMKKYTAVDKWNTQLKSLYQTINNRVS* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0636 439 Gene3D - 64 439 - -
Gso19g0636 439 Pfam PCI domain 307 406 IPR000717 -
Gso19g0636 439 PANTHER - 1 438 - -
Gso19g0636 439 SUPERFAMILY "Winged helix" DNA-binding domain 335 411 IPR036390 -
Gso19g0636 439 ProSiteProfiles PCI domain profile. 243 412 IPR000717 -
Gso19g0636 439 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 341 423 - -
Gso19g0636 439 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 1 438 - -
Gso19g0636 439 MobiDBLite consensus disorder prediction 1 23 - -
Gso19g0636 439 SMART PINT_4 341 423 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0636 Gso-Chr19 25402026 25408496 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0636 K12176 - gmx:100787019 846.654