Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0598 ATGCCGTTTTGCTACGTCGGAACGCAGCCATCTTCCCCCGTCGCCGATGCGCCCCTCAATAATGACATCAAGATATTCTACAGAACTTACGGTGGCGGTCCAACGAAAGTGCTTCTCATCATAGGATTGGCCGCGACACACGAAGCGTGGGGCCCACAAATCAAAGGCTTGACGGGAACCACCGTCTCCAACGACGACGACGACGACGACGTCCGCGTCGTTTGGAGCGGAGAAGAAGTAAATGGTGGCATCCATGTATGCGCGTTTGACAATCGCGGCGTGGGTCGCAGCTCCGTGGCCGTCTCAAAATCTGAATACTCAACCAAGATCATGGCAAAGGATGCAATTGCTTTGTTAGATCATCTAGGTTGGAAAAAAGCCCATGTTTTTGGGCACTCGATGGGAGCTATGATAGCTTGTAAAGTAGCAGCAATGGTTCCTGATAGAGTCCTTTCCTTGGCATTGCTCAATGTGACGGGTGGAGGTTTTCAATGTTTTCCAAAGTTGGACCAAAAAACAATCTCCGTTGCTTACCGTTTCTTGAAAGCGAAGACACCTGAACAAAGGGCTGCTGTTGACTTGGACACCCATTACTCTCAAGAATATCTTGAAGAATATGTTGGAACAGATAAGAGGAGAGCCATCTTATATCAGCAATATGTTAAAGGTATATCAACAACTGGGATGCAATCTAACTATGGTTTCGATGGTCAACTCAATGCATGTTGGACACATAAAATGACTGAAACAGAGATTGAGGTGATCAAATCTGCAGGTTTTCTTGTTTCAGTCATCCATGGCAGGCATGATATAATTGCTCAGATATATTATGCAAAAAGACTTGCTGAAAGGCTTCATCCAGTGGCTAGAATGGTAGATCTTCACGGAGGTCATTTAGTAAGTCATGAGCGGCCTGAAGAGGTTAATCAAGCACTATTTGACTTGATCAAGGCATCAGAAGTGAATATGAGCCCACATGATTGGACTAATTTGCCAAAGAAAGAGTCTTGGTGGAACGAGAAAAGGGTGTTGATCATAACAAACATTCAGGCCGGAAGAAATGTCTCCCTTAACGGCTGCATGTTAGAAAAACTGCATCTCTGCCTATTATACTTCTTTGGTCTCCTTGTTTTAGCATTTGAATATGGAAGAAAGCTTCTGAGAAGCTTAAAACCAACTCAAGTTGGAGTTTCCCCCTCATATATTGAAAGTCAATAA 1218 0.4433 MPFCYVGTQPSSPVADAPLNNDIKIFYRTYGGGPTKVLLIIGLAATHEAWGPQIKGLTGTTVSNDDDDDDVRVVWSGEEVNGGIHVCAFDNRGVGRSSVAVSKSEYSTKIMAKDAIALLDHLGWKKAHVFGHSMGAMIACKVAAMVPDRVLSLALLNVTGGGFQCFPKLDQKTISVAYRFLKAKTPEQRAAVDLDTHYSQEYLEEYVGTDKRRAILYQQYVKGISTTGMQSNYGFDGQLNACWTHKMTETEIEVIKSAGFLVSVIHGRHDIIAQIYYAKRLAERLHPVARMVDLHGGHLVSHERPEEVNQALFDLIKASEVNMSPHDWTNLPKKESWWNEKRVLIITNIQAGRNVSLNGCMLEKLHLCLLYFFGLLVLAFEYGRKLLRSLKPTQVGVSPSYIESQ* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0598 405 PANTHER EPOXIDE HYDROLASE 3 396 - -
Gso19g0598 405 SUPERFAMILY alpha/beta-Hydrolases 19 316 IPR029058 -
Gso19g0598 405 Pfam alpha/beta hydrolase fold 83 304 IPR000073 -
Gso19g0598 405 PRINTS Epoxide hydrolase signature 83 98 IPR000639 GO:0003824
Gso19g0598 405 PRINTS Epoxide hydrolase signature 129 142 IPR000639 GO:0003824
Gso19g0598 405 PRINTS Epoxide hydrolase signature 143 156 IPR000639 GO:0003824
Gso19g0598 405 PRINTS Epoxide hydrolase signature 293 315 IPR000639 GO:0003824
Gso19g0598 405 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 3 396 - -
Gso19g0598 405 Gene3D alpha/beta hydrolase 20 318 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0598 Gso-Chr19 20311029 20318192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0598 33 158 Acyl Lipid Metabolism Gene Families AT3G51000 33.333 6.74e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0598 - - gmx:100785963 798.119