Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0308 ATGTCTTGGTTCCTTGTAATTCTGTTTCTCAGCATCACACATGGTAGTGCTTCAGAGACTAGCCATGACAAGAAACTTCCTTCTGCTGTTGTGGTTGGCACTGTTTTTTGTGATACATGTTCTCAACAGGAATTCACCATTGGAAGCCATTTCATTTCAGGTGCCTCAGTAGCTGTGGAATGCAAAGATGGAAATTCAATTCCAAGATTCAAGAAAGAAGTAAAGACAGATGAATATGGTGAATTCAAACTGCAGCTACCATTCAAAGTGAGGAAACATGTGAGGAGAATCAAGGGATGCACTTTCAAGTTGTTAAGTAGCACTGACCCTCATTGTTCTGTGGCCTCAATTTCCACCTTTTCTACAGTGAGTCTCAAGACAAGAAAACAAGGAGAACTCATATTCTCAGCTGGATTCTTCTCATTCAAGCCTATAGAAAAGCCCAACTTTTGTAACAAAAAACAAGATGAATTTTTTCCAAATACATACCCATCAAAACCTACCCCAGAGAAGACTAAAGTGTTCAAAACCAATCCAACAACCAAAATTTCAGACAAATCTCAATCAGATAATAAATTTTTAGCTGAAGATTTCTTTTTTCCTCCAAACCCATTTTTCCCACCACCATTGGTCCCTAACCCATTTCAGCCTCCTCCCCTCATTCCAAACCCTTTTCAGCCACCTCCTCTTATTCCTAACCCATTTCAACCACCAAGCCCACCACTCATTCCAAACCCATTCCAGCCACCAAGCCCACCACCACTCATCCCTAACCCATTCCAGCCCCCTCCAAGCCCACCAACTCTCTTCCCTAACCCATTCCAGCCCCCTCCAAGCCCACCACCCTCTTTGTTTCCTCCTTTTCCACCATTAGTAATACCAGGTTTGACTCCATCACCACCACCACCTCCACCAACAAAACCAATTTTCCCTCCTTTCCCTCCACTATTCCCACCTCTATTCCCTCCACCTCATAGCCCTGGCACACCCCCTGCTTCAGCTTCTATGAACACTTCTCCTTGA 1023 0.4389 MSWFLVILFLSITHGSASETSHDKKLPSAVVVGTVFCDTCSQQEFTIGSHFISGASVAVECKDGNSIPRFKKEVKTDEYGEFKLQLPFKVRKHVRRIKGCTFKLLSSTDPHCSVASISTFSTVSLKTRKQGELIFSAGFFSFKPIEKPNFCNKKQDEFFPNTYPSKPTPEKTKVFKTNPTTKISDKSQSDNKFLAEDFFFPPNPFFPPPLVPNPFQPPPLIPNPFQPPPLIPNPFQPPSPPLIPNPFQPPSPPPLIPNPFQPPPSPPTLFPNPFQPPPSPPPSLFPPFPPLVIPGLTPSPPPPPPTKPIFPPFPPLFPPLFPPPHSPGTPPASASMNTSP* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0308 340 MobiDBLite consensus disorder prediction 216 330 - -
Gso19g0308 340 PANTHER EXPRESSED PROTEIN 1 262 - -
Gso19g0308 340 PRINTS Proline rich extensin signature 159 171 - -
Gso19g0308 340 PRINTS Proline rich extensin signature 205 217 - -
Gso19g0308 340 PRINTS Proline rich extensin signature 217 238 - -
Gso19g0308 340 PRINTS Proline rich extensin signature 246 262 - -
Gso19g0308 340 PRINTS Proline rich extensin signature 263 280 - -
Gso19g0308 340 PANTHER EXPRESSED PROTEIN 1 262 - -
Gso19g0308 340 Pfam Pollen protein Ole e 1 like 31 116 - -
Gso19g0308 340 MobiDBLite consensus disorder prediction 216 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0308 Gso-Chr19 4635334 4637180 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0308 - - gmx:100781880 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0342 13 14872504 14874372 Gso19g0308 19 4635334 4637180 GST
Gso19g0308 19 4635334 4637180 Gso18g2246 18 55380561 55382406 PCT
Gso19g0308 19 4635334 4637180 Gso8g2068 8 22090940 22092626 PCT