Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2026 ATGGGTCACTCCAATTCTTCCTCCTCCTCGTCACCTTCCAAGCGCGGCCACGCGCTGCGGCAATGGCGGCTCCTGGACTTGGTCTCCGGCGTGTTCTTCTTCCTGGTGCTGCTCTTCTTCACCATGGTCTTTACCCCGCTCGGTGACTCGCTCGCCGCCTCCGGCCGCCAGACGCTGCTCCGCTCCGGCGCCGACCCGCAGCAGCGCCACCGCCTCGTGGCGGCGATCGAGGCGGGTGGACGCGGCGTGGAGGCGTGCCCCGCTGCGGACGCGGACCACATGCCGTGCGAGGATCCGAGGCTGAACAGCCAGCTGAGCAGGGAGATGAACTACTACAGGGAGAGGCACTGCCCCAGGCCGGAGGACTCGCCCCTATGCTTGATTCCGCCGCCCCATGGGTACCGGGTGCCGGTGCCGTGGCCGGAGAGCTTGCACAAGATATGGCACAGCAACATGCCATACAACAAGATTGCTGACAGGAAAGGTCACCAGGGATGGATGAAACTAGAAGGTCAACACTTTATATTCCCTGGTGGTGGTACGATGTTTCCAGATGGAGCAGAGCAATATATTGAAAAACTTGGTCAATACATTCCTATAAGTGAAGGTGTTCTGAGGACTGCGCTTGACATGGGGTGTGGGGTTGCTAGTTTTGGAGGATATATGCTATCTAAAAATATTTTAACCATGTCTTTTGCTCCAAGAGATTCACATAAAGCTCAAATACAATTTGCCTTGGAAAGAGGAATACCAGCTTTTGTTGCTATGCTTGGCACTCGCAGACTCCCATTTCCTGCGTTTGGATTTGACTTAGTTCATTGCTCTAGGTGCTTGATCCCATTTACAGCCTACAATGCCTCTTATTTCATTGAAGTGGACAGATTACTTCGCCCTGGTGGATATTTAGTCATCTCCGGTCCCCCTGTTCAGTGGCCTAAACAAGATAAAGAATGGTCTGATCTCCAAGCGGTGGCAAGAGCCTTGTGTTATGAACTGATTGCTGTAGATGGTAACACTGTGATCTGGAAGAAGCCTGTGGGAGAATCATGTCTTCCCAATGAAAATGAATTTGGTCTTGAGTTATGTGATGATTCAGATTACCCAAGTCAAGCTTGGTACTTCAAATTGAAGAAATGTGTCAGTAGGACATCTGTTAAAGGTGATTATGCTATTGGGATAATTCCCAAGTGGCCAGAGAGGCTAACTGCAATACCTCCAAGATCCACACTCCTGAAAAATGGTGTTGATGTGTATGAGGCTGACACTAAGCGGTGGGCAAGGAGGGTGGCACACTATAAGAATTCTCTAAAAATCAAGTTGGGCACTCGATTTGTGCGCAATGTCATGGACATGAATGCATTATTTGGAGGTTTTGCGGCAGCCTTAAAATCTGATCCTGTGTGGGTGATCAATGTAGTTCCTGCACTAAAGCCACCCACTCTTGATGTTATCTTTGACAGAGGCCTTATTGGAGTCTATCATGACTGGTGCGAACCATTTTCAACATATCCTCGTAGCTATGATCTAATCCATGTGGCCAGCATTGAATCCCTTATAAAAGATCCAGCATCTGGTCAAAACAGATGTACTCTTGTTGATTTGATGGTGGAAATTGATCGAATGTTGCGTCCTGAGGGAACTGTGGTGGTAAGGGATGCCCCTGAAGTAATTGACAGAGTAGCTCGCATTGCCAGTGCAGTGAGGTGGAAGCCTACCGTCTATGATAAAGAACCCGAATCACACGGCAGAGAAAAGATTCTAGTTGCGACCAAGACACTCTGGAAGCTCTAA 1791 0.4953 MGHSNSSSSSSPSKRGHALRQWRLLDLVSGVFFFLVLLFFTMVFTPLGDSLAASGRQTLLRSGADPQQRHRLVAAIEAGGRGVEACPAADADHMPCEDPRLNSQLSREMNYYRERHCPRPEDSPLCLIPPPHGYRVPVPWPESLHKIWHSNMPYNKIADRKGHQGWMKLEGQHFIFPGGGTMFPDGAEQYIEKLGQYIPISEGVLRTALDMGCGVASFGGYMLSKNILTMSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFGFDLVHCSRCLIPFTAYNASYFIEVDRLLRPGGYLVISGPPVQWPKQDKEWSDLQAVARALCYELIAVDGNTVIWKKPVGESCLPNENEFGLELCDDSDYPSQAWYFKLKKCVSRTSVKGDYAIGIIPKWPERLTAIPPRSTLLKNGVDVYEADTKRWARRVAHYKNSLKIKLGTRFVRNVMDMNALFGGFAAALKSDPVWVINVVPALKPPTLDVIFDRGLIGVYHDWCEPFSTYPRSYDLIHVASIESLIKDPASGQNRCTLVDLMVEIDRMLRPEGTVVVRDAPEVIDRVARIASAVRWKPTVYDKEPESHGREKILVATKTLWKL* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2026 596 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 13 595 IPR004159 GO:0008168
Gso18g2026 596 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 92 591 IPR004159 GO:0008168
Gso18g2026 596 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 442 560 IPR029063 -
Gso18g2026 596 PANTHER PMT16, PUTATIVE-RELATED 13 595 - -
Gso18g2026 596 Gene3D Vaccinia Virus protein VP39 181 344 IPR029063 -
Gso18g2026 596 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 318 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2026 Gso-Chr18 53001697 53007108 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2026 K23872 - gmx:100788069 1200.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2026 18 53001697 53007108 Gso9g2184 9 46147342 46152535 GST
Gso18g2026 18 53001697 53007108 Gso7g0673 7 7186400 7194319 PCT
Gso7g0673 7 7186400 7194319 Gso18g2026 18 53001697 53007108 PCT