Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1584 ATGGCTGGAGACTATGCTATAAGGAAAGACGAACCAACTGCAATCACTAATGAAAGTAGCCTAGCTGACGTTGCGCTATATGAGCGGTGGGAGCGATCCAACCGGCTCAGCGTGATGTTCATTAAGACCAAAATCTCGACTGGGATACATGGTTCTGTTGACCAGCATGAAAAGGTCCAAGACTTGCTTAAGGCCATTGATGACCAGTTCATCACTTCAGATAAGACTTTAGCAAGCACCTTGATCATGAAGTTCTCTTCTCTTCGGCTCACCAGTGTGAAAGGTGAAGAAGAAAGGCTTGTAATGGAGATGGGTGAGAGTGCATTGCTGACTACTGCTTATGGGAAGAACAAAGCAATTAAGTCTCAAGCTAATCAGAAGGGGAATGGTAAAATACCACCTCAAGCTGATATTAAGAAGGTGGCAAAGTGTTTCTTTTGCAAGAAGAAGGGACACGTGAAGAAGAATTGCCCCGGGTTCCAGAAATGGCTTGAGAAGAAAGTATGCACGGCATCCGTAATTTCAGGCGTGAGACAAAGTACCAAGTATCGTTCTAACAAAAATGTCGCCATCTTTGTTTCCAATAAAGATAATTTACAGAAAACAAGAGGCCCAAAATACTTACAGCCAACACATAAAATTTGGTCCTGCTGCAACCCTTTTCTCTCCGAGTTTCCTTCCTCTATTGTTTTTCTAACCCAAGCAAATACATGCTTGCATTGTTATGTAAAGATGATTGCACTCAAATCCCTTCATCCTTTCTTCACTCCTACCAATATCAAATATGGTATCAACCGAAGCAGATGCCTCAACACAAAAGGTTCTGTTTTGTGCCTCTGCAAGTCCAATGAATCTGAATCTCAAGCTCCCCAACCAGGAGATATTCGTAAACAAGAACTGCTAGCCCAAATTGCCATGCTTCAAACTCAGAAAGTCCGTCTCACAGATTATTTTGATGAGAGATCTGAATACTTAACCCAGTTTGGTGAAGAAGCCAAGGCCGAGTTTGACAAGATTGGAAAAGATGCCCTCCAAGGATTAGATGAAGCTAGTGCCATTATAACAGCAAACATAGAGAGCCAGATGGTGGAGTTTGAGGAATCTGCAGAACTTAACAGACAAGAGATTCAGGAGCATGAAAAAGAACTAGGTGAATTTGAAGTTCAAATGGAGGATGGAAGAAATGAAGGGCTGTTCTTTAAGAACCTCAGAAGGAGGACACCTGTTGACAAATCAAAAGCCAAGGAGGAGGCAGAGAAAATCAAAGATGTAGCCAGAGAAAAAGCTGGTAGCAGAACAAGGAAAGGCTTTTACCTCCTCTTTATTGGCCTACTGACCTTTGCAATAGTTGATTCTATTGCCTCATCATCAACTGATTGGAAAAATATAGCAGTTCTTGGAGCTACTCTTGTGGCTTTAGTTTCTCAGTTCATCTACGAACAGACAATGTCATTAGAAACTGGAGAAAAAAGAAAGACCGACACAGAAGAGGAAAATAACTGA 1503 0.4178 MAGDYAIRKDEPTAITNESSLADVALYERWERSNRLSVMFIKTKISTGIHGSVDQHEKVQDLLKAIDDQFITSDKTLASTLIMKFSSLRLTSVKGEEERLVMEMGESALLTTAYGKNKAIKSQANQKGNGKIPPQADIKKVAKCFFCKKKGHVKKNCPGFQKWLEKKVCTASVISGVRQSTKYRSNKNVAIFVSNKDNLQKTRGPKYLQPTHKIWSCCNPFLSEFPSSIVFLTQANTCLHCYVKMIALKSLHPFFTPTNIKYGINRSRCLNTKGSVLCLCKSNESESQAPQPGDIRKQELLAQIAMLQTQKVRLTDYFDERSEYLTQFGEEAKAEFDKIGKDALQGLDEASAIITANIESQMVEFEESAELNRQEIQEHEKELGEFEVQMEDGRNEGLFFKNLRRRTPVDKSKAKEEAEKIKDVAREKAGSRTRKGFYLLFIGLLTFAIVDSIASSSTDWKNIAVLGATLVALVSQFIYEQTMSLETGEKRKTDTEEENN* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1584 500 Coils Coil 362 396 - -
Gso18g1584 500 ProSiteProfiles Zinc finger CCHC-type profile. 143 158 IPR001878 GO:0003676|GO:0008270
Gso18g1584 500 SUPERFAMILY Retrovirus zinc finger-like domains 142 167 IPR036875 GO:0003676|GO:0008270
Gso18g1584 500 Gene3D - 119 167 - -
Gso18g1584 500 PANTHER 8-AMINO-7-OXONONANOATE SYNTHASE 245 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1584 Gso-Chr18 47015941 47025993 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1584 - - gsj:114397334 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1584 18 47015941 47025993 Gso7g1230 7 17482315 17483783 GST
Gso18g1584 18 47015941 47025993 Gso1g0939 1 37796342 37803366 PCT
Gso18g1584 18 47015941 47025993 Gso3g0679 3 20603919 20606485 PCT