Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1556 ATGGCGGGGAAGCAATCCAAAGCCAGAAAGCCGGAGGTGTTCGGGAAGGGCAAGGTCACCCCTACTCAGATCGCTTTCATCGTCGACCGATACCTCTGCGACAACAACTTCTCTTCCACTCGATCCACCTTCAGAAACGAAGCCTCTTCCCTCATCTCCCATTCACCCATTCATGAGGCACCAAAGACTTTGTTGACATTGGGGGAGATGCTGGATGAGTATATCTGCTTGAAGGAGCAGAAAGTGATGTTGGATCAGGAACGGGCTGTTGTAGAACAAGAGAAGAACCGGGTTCAGATGCTGTTGCAAGGCATGCATAATGTAATGACTGCTTACAATGCTAGTGGAAATCTCCCTGCACCAGCACCTGCTGTAAAATCTGCAGTTGTAGCAGTTCCTAAACCAACACTTGGTTACAAATCTCAACCAGGCAATCCTACTTCTGTGCAAAATAAATCAAATGCACCGCCATTGCCTCAATCTAGCAATTCAAACGCTGAGGGTGGAAACTTCTCAACACCAACACTGAATGTATCTGACAGAAAGAGAAAGGAAACTAAAGCTGTGGATGTTCCTTCAGCTGCTAAAAAACCTCGTGGTAGATCATCCAGTAGGAAAATTGTCAGCCATGGTCAAAATGCTCCGCAACAATCTGATAAAGCTGTCAATAATACAATGGTAGCTCAGCCTTCTGCCATTCAATCTTCATCAGAGAACTGCATACCCAGGGAGTCACAGGTTCAGGGATCCAATGTTGCTAAATGTTTATTCAACCAGTCTACAACTTCTGTTCCAAGTAATTCACCGGTTCCGAAGACACCTCCTAGAACAAAATCTTCTCACAGTGACACACATATATCCCCTGCTGAGATTTCTTCGGTTGCAACTTGCAACCGTGCAGTTACACCCAGTCGTTGCACTGTAATTTCAACCAAGAGAGTTATGGTCAGCCCCGCAAAACAGATGGCTTACATAGAGATGAGTCGTTGTATTTCTCCTGTCAAGACAAATTCAAGTAAGAGGGATCATGTTAGGAGCAGGTTGAACTTTGATGCTGCCGATGTGCCTGGGAGTTTGGACAATCCATTGCCCAATGAGATTTCTACATCTGAGTCTGAAAAGGAATTGGACATATTTGACATTGATTTTCCTAACTTTGATGCCTTAGGGATGGACTTCTCCTTCACAGAAATGTTAAATGATCTAGACTTTTCTTGTGAAGGCATAGATTTTTCTTGCCATCCAACATCAAGTCCTTCAATGGACAATGCTTCAGGCTCGTCTCATGAATGCAATGGTGATCATGCTACACCTGAATTATCAACTGTGGCAGAAGTTATATGTGAGAAAGATATGAAAGTACTAGGCCCTGAATGTATGACTGCGATGAAATTTGTCACAAAGAGCATAACTGTTATAAGCCCTGAGAAAAACCGCCAGCAGTTTGTGGATCAGGAAAATTGTACATAA 1470 0.4381 MAGKQSKARKPEVFGKGKVTPTQIAFIVDRYLCDNNFSSTRSTFRNEASSLISHSPIHEAPKTLLTLGEMLDEYICLKEQKVMLDQERAVVEQEKNRVQMLLQGMHNVMTAYNASGNLPAPAPAVKSAVVAVPKPTLGYKSQPGNPTSVQNKSNAPPLPQSSNSNAEGGNFSTPTLNVSDRKRKETKAVDVPSAAKKPRGRSSSRKIVSHGQNAPQQSDKAVNNTMVAQPSAIQSSSENCIPRESQVQGSNVAKCLFNQSTTSVPSNSPVPKTPPRTKSSHSDTHISPAEISSVATCNRAVTPSRCTVISTKRVMVSPAKQMAYIEMSRCISPVKTNSSKRDHVRSRLNFDAADVPGSLDNPLPNEISTSESEKELDIFDIDFPNFDALGMDFSFTEMLNDLDFSCEGIDFSCHPTSSPSMDNASGSSHECNGDHATPELSTVAEVICEKDMKVLGPECMTAMKFVTKSITVISPEKNRQQFVDQENCT* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1556 489 Coils Coil 77 97 - -
Gso18g1556 489 MobiDBLite consensus disorder prediction 136 222 - -
Gso18g1556 489 MobiDBLite consensus disorder prediction 140 177 - -
Gso18g1556 489 MobiDBLite consensus disorder prediction 178 194 - -
Gso18g1556 489 MobiDBLite consensus disorder prediction 260 290 - -
Gso18g1556 489 MobiDBLite consensus disorder prediction 205 222 - -
Gso18g1556 489 PANTHER MYOSIN-M HEAVY PROTEIN 3 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1556 Gso-Chr18 46377559 46381027 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1556 - - gmx:100808727 952.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1556 18 46377559 46381027 Gso7g1207 7 16983704 16986933 GST
Gso18g1556 18 46377559 46381027 Gso1g0907 1 36951109 36954094 PCT
Gso18g1556 18 46377559 46381027 Gso3g0650 3 19874335 19877377 PCT
Gso1g0908 1 36971087 36974098 Gso18g1556 18 46377559 46381027 PCT